Detailed information NTG0921038

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: VOI49_RS09275
• Genome accession: NZ_CP142018
• Coordinates: 1836672..1837724 (-)
• Length: 350 a.a.
• NCBI ID: WP_003052788.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae strain lu24
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1831672..1842724

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VOI49_RS09250	rimI	1832242..1832667 (-)	426	WP_003052778.1	ribosomal protein S18-alanine N-acetyltransferase	-
VOI49_RS09255	tsaB	1832669..1833367 (-)	699	WP_003052781.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
VOI49_RS09260	-	1833653..1833883 (+)	231	WP_003052784.1	DNA-dependent RNA polymerase subunit epsilon	-
VOI49_RS09265	rnjA	1833885..1835567 (+)	1683	WP_003052786.1	ribonuclease J1	-
VOI49_RS09270	amiF	1835747..1836679 (-)	933	WP_226314027.1	ABC transporter ATP-binding protein	Regulator
VOI49_RS09275	oppD	1836672..1837724 (-)	1053	WP_003052788.1	ABC transporter ATP-binding protein	Regulator
VOI49_RS09280	-	1837736..1838767 (-)	1032	WP_003052791.1	ABC transporter permease	-
VOI49_RS09285	-	1838777..1839691 (-)	915	WP_003052794.1	ABC transporter permease	-
VOI49_RS09290	-	1839959..1841614 (-)	1656	WP_003052797.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 38697.39 Da
• Isoelectric Point: 5.8490

>NTDB_id=921038 VOI49_RS09275 WP_003052788.1 1836672..1837724(-) (oppD) [Streptococcus dysgalactiae strain lu24]
MTNETILSVKNLHVDFKTYAGDVKAIRDISFDLKKGETLAIVGESGSGKSVTTRTLMGLNAKNANLSGEIDFKGKKLNTL
KEEEWVKVRGKEIAMIFQDPMTSLDPTMKIGMQIAEAILIHENISKQEALSRALELMHQVGIPNAEEHINDYPHQWSGGM
RQRAVIAIALAANPEILIADEPTTALDVTIQAQILKLMKEIQQQTKSSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPQHPYTWGLLNSMPTTDTASGSLESIPGTPPDLLNPPKGDAFAARNEFALDIDHVEAPPMFKVSDTHYAATWLL
DERAPKVTPPVQIQKRWAKWQKREGGKLNE

Nucleotide

• Length: 1053 bp

>NTDB_id=921038 VOI49_RS09275 WP_003052788.1 1836672..1837724(-) (oppD) [Streptococcus dysgalactiae strain lu24]
ATGACAAACGAAACCATTTTAAGTGTTAAAAACCTCCACGTTGATTTCAAAACCTATGCAGGGGATGTGAAAGCTATTCG
AGATATTAGTTTTGACCTCAAAAAAGGAGAAACGCTTGCGATTGTTGGGGAATCTGGATCAGGAAAATCAGTGACCACTA
GGACCTTGATGGGCTTAAATGCTAAAAATGCTAACCTTTCTGGGGAAATTGATTTTAAAGGAAAAAAGCTCAATACCCTT
AAGGAAGAAGAATGGGTTAAGGTGCGTGGTAAAGAAATTGCCATGATTTTCCAAGACCCAATGACCAGTCTCGATCCAAC
GATGAAAATCGGAATGCAAATTGCTGAAGCTATTTTGATTCATGAGAATATTAGTAAGCAAGAAGCCTTGAGTCGCGCCC
TTGAATTGATGCATCAAGTAGGTATTCCAAATGCTGAAGAGCATATTAATGATTATCCACATCAGTGGTCAGGTGGGATG
CGTCAGCGTGCTGTGATTGCTATTGCTCTTGCAGCTAATCCAGAAATCCTGATTGCTGATGAACCGACCACAGCGCTTGA
TGTTACCATTCAGGCACAAATATTGAAATTAATGAAAGAAATCCAACAACAGACGAAATCGTCTATTATTTTCATTACCC
ATGACCTTGGAGTTGTGGCTGGTATGGCTGATCGTGTCGCGGTAATGTATGCTGGAAAAATTGTTGAGTATGGAACGGTG
GATGAAGTCTTTTATAACCCACAACACCCTTATACATGGGGCTTGCTTAATTCTATGCCAACTACAGATACCGCCTCAGG
GAGTTTAGAATCTATTCCAGGAACGCCGCCTGACTTGCTTAATCCTCCTAAGGGAGATGCTTTTGCAGCCCGCAATGAAT
TTGCCTTGGATATTGATCATGTGGAGGCTCCGCCGATGTTTAAGGTCAGCGACACCCATTATGCGGCAACTTGGTTATTA
GATGAGCGAGCGCCCAAAGTCACTCCGCCGGTTCAAATTCAAAAACGATGGGCAAAATGGCAAAAACGAGAAGGAGGCAA
GCTAAATGAATGA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (27-183)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.714	100	0.797
amiE	Streptococcus salivarius strain HSISS4	55.685	98	0.546
amiE	Streptococcus thermophilus LMG 18311	56.627	94.857	0.537
amiE	Streptococcus thermophilus LMD-9	56.627	94.857	0.537