Detailed information NTG0920959

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: VFH86_RS15965
• Genome accession: NZ_CP142015
• Coordinates: 678434..681007 (+)
• Length: 857 a.a.
• NCBI ID: WP_001026311.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain LK-18
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 673434..686007

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VFH86_RS15930 (VFH86_15930)	-	673482..673733 (-)	252	WP_001885413.1	YgjV family protein	-
VFH86_RS15935 (VFH86_15935)	-	674146..674466 (-)	321	WP_001089529.1	DUF496 family protein	-
VFH86_RS15940 (VFH86_15940)	-	674654..674851 (+)	198	WP_001246071.1	hypothetical protein	-
VFH86_RS15945 (VFH86_15945)	-	674893..675543 (+)	651	WP_001025625.1	YceH family protein	-
VFH86_RS15950 (VFH86_15950)	-	675543..675848 (+)	306	WP_345659038.1	GIY-YIG nuclease family protein	-
VFH86_RS15955 (VFH86_15955)	traF	675950..677110 (+)	1161	WP_142735367.1	conjugal transfer protein TraF	-
VFH86_RS15960 (VFH86_15960)	luxP	677322..678416 (+)	1095	WP_001907859.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
VFH86_RS15965 (VFH86_15965)	luxQ	678434..681007 (+)	2574	WP_001026311.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
VFH86_RS15970 (VFH86_15970)	-	680999..681664 (-)	666	WP_000268201.1	flagellar brake protein	-
VFH86_RS15975 (VFH86_15975)	-	681934..683586 (+)	1653	WP_148517826.1	ABC transporter ATP-binding protein	-
VFH86_RS15980 (VFH86_15980)	-	683579..685267 (+)	1689	WP_085603322.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 857 a.a.
• Molecular weight: 97022.00 Da
• Isoelectric Point: 6.3095

>NTDB_id=920959 VFH86_RS15965 WP_001026311.1 678434..681007(+) (luxQ) [Vibrio cholerae strain LK-18]
MNIRPSQIKHKQRIASFITHAVVVVMGVLIVSVLFQSYQISSRLMAQEGQRTSVQTSSLIQSLFDFRLAALRIHQDSTAK
NISLINALVSRDSSRLDAFFSSVDELELSNAPDLRFISSHDNILWDDGSASFYGIAQQELKKLIRKVAISGNWHLVQTSG
DGKPVHLLMRRSSLIETGTGQVVGYLYVGIVLNDNFALLENIRSGSNSENLVLTVDTTPLVSTLKGNEPYSLDYVVHSGK
DVMRDSFIVGQTFLEVENVPTYLCVYSIQTNQNVLTLRDNFYFWMAFALLSMIGVSIASRWWLQKRIQREIETLMNYTHK
LMELDTKSQFAGSKIYEFDYFGRTLEQSFRRLANKEKQFEDLFNFALSPTMLWNTSGRLIRMNPSAQIQFLREDAQNHFL
FEILERQLLPTITKAAQGNNPSDVTTEVDGRVYRWNLSPIMVEGQIISIITQGQDITTIAEAEKQSQAARREAEESARVR
AEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVC
AIDRIYRPLCHEKGLELVVNSNITTATIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEGDPLAQLVIQVVDTGI
GIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVERPDAPQQLLPAP
DPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKKVLH
LPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHFKYHHGQKNAGLN

Nucleotide

• Length: 2574 bp

>NTDB_id=920959 VFH86_RS15965 WP_001026311.1 678434..681007(+) (luxQ) [Vibrio cholerae strain LK-18]
TTGAACATTCGACCTAGCCAAATCAAGCATAAACAGCGCATCGCTTCATTTATCACCCATGCTGTGGTGGTGGTGATGGG
CGTTCTGATCGTCAGTGTATTATTCCAAAGTTACCAGATCAGTAGCCGCTTGATGGCTCAAGAAGGGCAACGCACCTCAG
TTCAAACCTCCAGCTTGATTCAAAGTTTGTTTGATTTTCGTCTTGCGGCACTGCGAATTCACCAAGACAGCACAGCCAAA
AATATCAGTTTAATCAATGCACTTGTCAGCCGAGATTCGAGTCGGTTGGATGCGTTTTTTTCCAGTGTCGATGAACTTGA
ACTCTCTAATGCACCGGATCTGCGGTTTATTTCCAGTCACGACAACATCCTTTGGGATGATGGCAGCGCCTCCTTTTACG
GCATTGCCCAACAAGAGCTGAAGAAGCTTATCCGTAAAGTGGCGATCAGTGGCAATTGGCATTTGGTTCAAACGTCTGGC
GATGGTAAACCCGTGCATTTGTTAATGCGCCGCTCATCACTGATTGAAACAGGAACTGGGCAGGTGGTTGGGTACCTGTA
TGTGGGAATCGTACTCAATGATAACTTTGCGCTGTTGGAAAATATCCGCAGTGGCAGTAACTCAGAAAACCTAGTTCTGA
CCGTAGACACCACACCGCTCGTCTCCACCTTGAAAGGCAATGAACCTTATTCGCTGGACTATGTGGTGCACAGTGGAAAA
GATGTCATGAGGGACAGCTTTATTGTTGGCCAAACCTTCTTAGAAGTAGAAAATGTACCGACCTATCTGTGCGTCTACTC
GATTCAGACCAACCAAAATGTGCTCACCCTGCGGGATAATTTCTATTTTTGGATGGCGTTTGCGCTGCTCAGTATGATTG
GTGTTTCCATAGCATCACGCTGGTGGTTACAAAAACGTATTCAGCGAGAAATCGAAACCCTAATGAATTACACCCATAAA
TTGATGGAGCTGGACACCAAGAGCCAGTTTGCTGGTTCTAAAATTTATGAGTTCGACTATTTTGGGCGAACGTTGGAACA
ATCATTCCGTCGTCTCGCCAATAAAGAAAAGCAGTTTGAAGATCTGTTTAACTTTGCGCTCTCACCGACCATGCTTTGGA
ATACCTCTGGTCGACTGATCCGCATGAACCCCTCAGCGCAAATCCAGTTTTTGCGCGAAGATGCGCAAAACCATTTCTTA
TTTGAGATTCTTGAACGCCAACTGTTGCCGACCATCACTAAGGCGGCACAGGGCAATAATCCGAGTGACGTCACAACCGA
AGTAGATGGTCGTGTGTACCGCTGGAACCTTTCACCGATCATGGTGGAAGGGCAGATCATTTCCATCATTACTCAAGGGC
AAGATATCACCACCATCGCGGAAGCGGAGAAACAAAGCCAAGCCGCAAGGCGCGAAGCGGAAGAGTCGGCACGGGTCAGA
GCCGAGTTTTTGGCCAAAATGAGTCACGAATTGCGCACGCCGCTCAATGGTGTGCTCGGCGTTTCCCAACTGCTAAAACG
GACCCCTCTCAATGATGAACAGCGCGAACACGTGGCTGTGTTATGCAGCAGTGGTGAACATTTGCTCGCGGTGTTGAATG
ACATCTTGGATTTTTCACGCTTAGAGCAGGGCAAATTCCGTATTCAAAAGAATGAGTTTCGCCTTAAAGAGCTGGTGTGC
GCGATTGACCGCATTTATCGACCTTTATGTCATGAAAAAGGCTTGGAACTGGTGGTGAATTCCAATATCACCACCGCTAC
CATTGTGCGCAGCGATCAGATCCGGATTAACCAAATCTTGTTCAATTTGCTCAATAACGCGATCAAGTTTACTCACCAAG
GTTCGATACGTGTCGAATTGCAATTAATTGAAGGTGATCCGTTAGCTCAGCTGGTGATTCAAGTCGTCGATACGGGGATT
GGTATACGCGAACAAGATTTAACGGTGATTTTTGAACCCTTCATGCAGGCTGAATCGACCACCACTCGAGAGTACGGCGG
AAGTGGTTTAGGCTTAACGATTGTGCACAGTTTAGTGGAAATGCTCAGTGGTCAACTGCACGTCAGCTCCGAGTATGGCA
TCGGTACACGTTTTGAAATTCAGTTACCGATTGAGCTGGTAGAAAGACCGGATGCTCCGCAGCAGTTGTTACCGGCTCCT
GACCCTCAACCGTTATTTGATAAAACTCTGCGTGTACTGTTGGTGGAGGATAACCACACCAACGCCTTTATTGCTCAAGC
ATTCTGTCGTAAGTATGGCTTAGATGTGAGTTGGGTAACCGATGGACTACAGGCGATTGAAGAGCTCAAAATACATGATT
ACGACTTAGTGCTGATGGATAACCAGTTACCCTATCTGGATGGCGTTGAGACCACGCGCACCATCAAAAAGGTGCTGCAT
CTTCCGGTGGTGGTGTATGCCTGTACTGCGGATGGCTTAGAAGAAACACGGCAAGCATTTTTCCATGCGGGCGCGGAATA
TGTATTAGTTAAGCCGCTGAAAGAGCAGACTTTGCATAAAGCGCTGGAGCATTTCAAATATCATCATGGCCAAAAAAACG
CTGGTTTAAATTGA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (480-544)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (592-705)

• Response regulator receiver domain (Response_reg) (732-842)

• LuxQ, periplasmic (LuxQ-periplasm) (41-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	97.2	100	0.972