Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   VML59_RS06115 Genome accession   NZ_CP142003
Coordinates   1213299..1213982 (+) Length   227 a.a.
NCBI ID   WP_000350722.1    Uniprot ID   -
Organism   Bacillus pacificus strain AT31     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1208299..1218982
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VML59_RS06095 - 1209368..1211014 (+) 1647 WP_000728614.1 peptide ABC transporter substrate-binding protein -
  VML59_RS06100 - 1211044..1211247 (-) 204 WP_000559976.1 hypothetical protein -
  VML59_RS06105 spx 1211840..1212235 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  VML59_RS06110 - 1212285..1212959 (-) 675 WP_000362602.1 TerC family protein -
  VML59_RS06115 mecA 1213299..1213982 (+) 684 WP_000350722.1 adaptor protein MecA Regulator
  VML59_RS06120 - 1214055..1215599 (+) 1545 WP_000799204.1 cardiolipin synthase -
  VML59_RS06125 - 1215680..1216924 (+) 1245 WP_074567615.1 competence protein CoiA -
  VML59_RS06130 pepF 1216975..1218801 (+) 1827 WP_000003391.1 oligoendopeptidase F Regulator

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26951.98 Da        Isoelectric Point: 3.9822

>NTDB_id=920804 VML59_RS06115 WP_000350722.1 1213299..1213982(+) (mecA) [Bacillus pacificus strain AT31]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQEVVEEVEEQAGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=920804 VML59_RS06115 WP_000350722.1 1213299..1213982(+) (mecA) [Bacillus pacificus strain AT31]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGCTTTAATCG
TGAGGAAATTTGGTATGACCGCGAAAGAAGCGAAGAGCTCTTTTGGGAAATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCAGAACTT
TCAAAGGATGGACAAAAGCTAGAACTACCAATAGGTGTAGATAAAATTATAGACATTCCTCTAGATGAAGGTATTGAATC
ATTATTCCAGCAAGAAGTAGTGGAAGAGGTAGAAGAACAAGCAGGTACAAACTTTAACGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGCCACCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGCATTTTAAG
CATTGTTTTAGAATACGGGGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564