Detailed information NTG0920735

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: VDS58_RS14245
• Genome accession: NZ_CP141997
• Coordinates: 2611399..2613729 (-)
• Length: 776 a.a.
• NCBI ID: WP_159376963.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PM0031
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2606399..2618729

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VDS58_RS14210 (VDS58_14210)	yqxA	2606736..2607074 (-)	339	WP_032726189.1	YqxA family protein	-
VDS58_RS14215 (VDS58_14215)	spoIIP	2607091..2608296 (-)	1206	WP_014477383.1	spore autolysin SpoIIP	-
VDS58_RS14220 (VDS58_14220)	gpr	2608359..2609465 (-)	1107	WP_014480309.1	GPR endopeptidase	-
VDS58_RS14225 (VDS58_14225)	rpsT	2609669..2609935 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
VDS58_RS14230 (VDS58_14230)	holA	2609950..2610993 (-)	1044	WP_159376962.1	DNA polymerase III subunit delta	-
VDS58_RS14235 (VDS58_14235)	-	2611033..2611146 (-)	114	WP_134975484.1	hypothetical protein	-
VDS58_RS14240 (VDS58_14240)	yqzM	2611223..2611357 (+)	135	WP_003229983.1	YqzM family protein	-
VDS58_RS14245 (VDS58_14245)	comEC	2611399..2613729 (-)	2331	WP_159376963.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
VDS58_RS14250 (VDS58_14250)	comEB	2613733..2614302 (-)	570	WP_003229978.1	ComE operon protein 2	-
VDS58_RS14255 (VDS58_14255)	comEA	2614369..2614986 (-)	618	WP_032726193.1	competence protein ComEA	Machinery gene
VDS58_RS14260 (VDS58_14260)	comER	2615070..2615891 (+)	822	WP_159376964.1	late competence protein ComER	-
VDS58_RS14265 (VDS58_14265)	yqeM	2615957..2616700 (-)	744	WP_032726197.1	class I SAM-dependent DNA methyltransferase	-
VDS58_RS14270 (VDS58_14270)	rsfS	2616697..2617053 (-)	357	WP_014480315.1	ribosome silencing factor	-
VDS58_RS14275 (VDS58_14275)	yqeK	2617071..2617631 (-)	561	WP_014480316.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
VDS58_RS14280 (VDS58_14280)	nadD	2617621..2618190 (-)	570	WP_004398676.1	nicotinate-nucleotide adenylyltransferase	-
VDS58_RS14285 (VDS58_14285)	yhbY	2618202..2618492 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86609.13 Da
• Isoelectric Point: 7.2641

>NTDB_id=920735 VDS58_RS14245 WP_159376963.1 2611399..2613729(-) (comEC) [Bacillus subtilis strain PM0031]
MRNSRLLLPMAAASATAGITAAAYFPAIFLFILFLLIMLIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYQF
KAVIDTIPKIDGDRMSMMVKTPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPNHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCSEPENFKYKVLSLRKHIISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFYIIIRLGITREKASILLLLFLPLYVMLTGAAPSVLRAALMAGVYLAGSLVKWRVHSATAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFHQVKTSLGQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGA
VAGVLLLSLSASFGRLFFSWFDLLVSWTNRLITNIADVDVFTIMIAHPAPALLFLFTVTIILLLMAIEKRSLSQSMVTGG
ICCAVLFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGEKMLIPFLTAKG
IKQLDALILTHADQDHIGEAEILLKHHKVKRLVIPKGFVSEPKDEKVLQTAREEGVTIEEVKRGDVLQIKDLQFHVLSPE
APDPASKNNSSLVLWMETGGMSWILTGDLEKEGEQEVMNVFPNIKADVLKVGHHGSKGSTGEEFIQQLQPKTAIISAGKN
NRYHHPHQEVLQILQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=920735 VDS58_RS14245 WP_159376963.1 2611399..2613729(-) (comEC) [Bacillus subtilis strain PM0031]
ATGCGTAATTCGCGTTTGTTATTGCCTATGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTTTTCATCCTCTTTCTCCTCATCATGTTAATCAAAACGAGGCACGCTTTTCTTATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACCTATCAATTC
AAGGCAGTGATTGACACTATTCCCAAAATTGACGGTGACCGTATGTCTATGATGGTTAAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCAGTCTGCTGGTGAAAAAGAACAGCTGTTATACATAGAACCAGGAATGTCATGTGAGTTGA
CTGGTACATTGGAAGAACCGAATCACGCAACTGTGCCGGGTGCATTTGATTATAACGAGTATCTTTATCGGCAGCATATT
CATTGGAACTACTCTGTCACGTCTATCCAAAACTGCAGTGAACCTGAAAATTTTAAGTACAAGGTGCTCAGCTTGAGAAA
ACATATCATATCATTCACAAACAGCCTTCTGCCTCCTGATTCGGCAGGAATTGTACAGGCACTTACAGTCGGTGACAGAT
TTTATGTGGAGGACGAAGTGCTTACCGCGTATCAAAAGCTTGGTGTTGTCCATCTCTTGGCGATATCAGGACTCCACGTG
GGGATTTTGACAGCAGGTTTGTTTTATATCATAATCCGTCTTGGTATAACTAGAGAAAAGGCGTCAATTCTGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACCGGCGCTGCTCCTTCAGTGCTACGCGCCGCTCTCATGGCGGGTGTTTACTTAG
CTGGAAGCCTTGTCAAATGGCGTGTCCACTCTGCAACTGCAATTTGTCTTTCATACATCGTCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATTCTATCCTCTTCTATTTTTCATCA
GGTTAAAACCTCCTTGGGGCAGCTGACAATTGTATCACTCATCGCTCAGCTGGGCTCGCTTCCGATTCTCCTATATCATT
TTCATCAGTTTTCTATCATCAGCGTACCGATGAATATGTTGATGGTACCATTTTATACCTTCTGTATTTTGCCGGGAGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCGCTTCGTTTGGGAGATTGTTTTTCAGCTGGTTTGATTTATTGGTAAGCTG
GACCAATAGGCTAATCACAAACATTGCAGATGTTGATGTGTTCACGATTATGATCGCACATCCTGCACCTGCTTTGCTTT
TTTTATTCACGGTCACGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTGTCGCAGTCGATGGTAACCGGAGGC
ATTTGCTGCGCGGTGCTGTTTCTGCTCTTTATATATCCGTGTCTTAGTTCCGAAGGAGAAGTGGATATGATAGATATTGG
ACAGGGTGACAGCATGTTTGTAGGTGCTCCGCATCAGCGGGGTCGTGTCTTAATTGATACCGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCGTTTTCACTGGGGGAAAAGATGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAAACAGCTTGACGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGATTCTGCTGAAGCATCA
TAAAGTAAAGCGCCTCGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAGAAAGTGCTGCAGACAGCCAGAGAAG
AGGGAGTGACAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCTGAA
GCACCTGATCCGGCAAGCAAAAATAATTCCTCTCTCGTTCTGTGGATGGAGACGGGCGGTATGAGCTGGATCTTGACGGG
TGATCTGGAGAAAGAAGGGGAACAAGAGGTGATGAACGTGTTTCCGAATATAAAAGCAGATGTCTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCATCCAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCCGGGAAAAAC
AATCGGTACCATCATCCTCATCAAGAAGTTCTGCAAATATTACAAAGGCATTCTATCCGTGTGCTGCGTACAGATCAAAA
CGGAACGATCCAATATAGATATAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (19-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	97.68	100	0.977