Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   VDS58_RS06720 Genome accession   NZ_CP141997
Coordinates   1272021..1272212 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain PM0031     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1267021..1277212
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VDS58_RS06690 (VDS58_06690) argF 1267883..1268842 (+) 960 WP_128747033.1 ornithine carbamoyltransferase -
  VDS58_RS06695 (VDS58_06695) yjzC 1268927..1269106 (+) 180 WP_003245356.1 YjzC family protein -
  VDS58_RS06700 (VDS58_06700) yjzD 1269153..1269338 (-) 186 WP_160245280.1 YjzD family protein -
  VDS58_RS06705 (VDS58_06705) - 1269589..1270323 (+) 735 WP_003245223.1 hypothetical protein -
  VDS58_RS06710 (VDS58_06710) - 1270405..1270962 (+) 558 WP_160245279.1 hypothetical protein -
  VDS58_RS06715 (VDS58_06715) med 1271053..1272006 (+) 954 WP_041351863.1 transcriptional regulator Med Regulator
  VDS58_RS06720 (VDS58_06720) comZ 1272021..1272212 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  VDS58_RS06725 (VDS58_06725) yjzB 1272242..1272478 (-) 237 WP_072173825.1 spore coat protein YjzB -
  VDS58_RS06730 (VDS58_06730) fabH 1272643..1273581 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  VDS58_RS06735 (VDS58_06735) fabF 1273604..1274845 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  VDS58_RS06740 (VDS58_06740) yjaZ 1274921..1275706 (+) 786 WP_160245278.1 DUF2268 domain-containing protein -
  VDS58_RS06745 (VDS58_06745) appD 1275898..1276884 (+) 987 WP_260665417.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=920706 VDS58_RS06720 WP_003224559.1 1272021..1272212(+) (comZ) [Bacillus subtilis strain PM0031]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=920706 VDS58_RS06720 WP_003224559.1 1272021..1272212(+) (comZ) [Bacillus subtilis strain PM0031]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1