Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   VDS58_RS02210 Genome accession   NZ_CP141997
Coordinates   436966..437916 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain PM0031     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 431966..442916
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VDS58_RS02185 (VDS58_02185) rapC 433421..434569 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  VDS58_RS02190 (VDS58_02190) phrC 434553..434675 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  VDS58_RS02195 (VDS58_02195) yczM 434774..434863 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  VDS58_RS02200 (VDS58_02200) yczN 434945..435058 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  VDS58_RS02205 (VDS58_02205) thrD 435211..436575 (-) 1365 WP_021481755.1 aspartate kinase -
  VDS58_RS02210 (VDS58_02210) ceuB 436966..437916 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  VDS58_RS02215 (VDS58_02215) yclO 437909..438856 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  VDS58_RS02220 (VDS58_02220) yclP 438850..439608 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  VDS58_RS02225 (VDS58_02225) yclQ 439630..440583 (+) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  VDS58_RS02230 (VDS58_02230) - 440813..441235 (+) 423 WP_250615391.1 hypothetical protein -
  VDS58_RS02235 (VDS58_02235) - 441337..441744 (+) 408 WP_250615392.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=920696 VDS58_RS02210 WP_014475804.1 436966..437916(+) (ceuB) [Bacillus subtilis strain PM0031]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=920696 VDS58_RS02210 WP_014475804.1 436966..437916(+) (ceuB) [Bacillus subtilis strain PM0031]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGTTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525