Detailed information NTG0920693

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AB3N48_RS21395
• Genome accession: NZ_CP162198
• Coordinates: 4416873..4417898 (+)
• Length: 341 a.a.
• NCBI ID: WP_001550015.1
• Uniprot ID: -
• Organism: Escherichia coli strain STK39-3-E
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4411873..4422898

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3N48_RS21375 (AB3N48_21360)	metJ	4412934..4413251 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AB3N48_RS21380 (AB3N48_21365)	yiiX	4413435..4414043 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AB3N48_RS21385 (AB3N48_21370)	rpmE	4414104..4414316 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AB3N48_RS21390 (AB3N48_21375)	priA	4414519..4416717 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
AB3N48_RS21395 (AB3N48_21380)	cytR	4416873..4417898 (+)	1026	WP_001550015.1	DNA-binding transcriptional regulator CytR	Regulator
AB3N48_RS21400 (AB3N48_21385)	ftsN	4417990..4418949 (+)	960	WP_000068828.1	cell division protein FtsN	-
AB3N48_RS21405 (AB3N48_21390)	hslV	4419042..4419572 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AB3N48_RS21410 (AB3N48_21395)	hslU	4419582..4420913 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AB3N48_RS21415 (AB3N48_21400)	menA	4420980..4421906 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AB3N48_RS21420 (AB3N48_21405)	rraA	4421999..4422484 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AB3N48_RS21425 (AB3N48_21410)	zapB	4422569..4422814 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37818.84 Da
• Isoelectric Point: 6.8163

>NTDB_id=920693 AB3N48_RS21395 WP_001550015.1 4416873..4417898(+) (cytR) [Escherichia coli strain STK39-3-E]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYKQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=920693 AB3N48_RS21395 WP_001550015.1 4416873..4417898(+) (cytR) [Escherichia coli strain STK39-3-E]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATAAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628