Detailed information NTG0092054

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: OCU78_RS11560
• Genome accession: NZ_AP025490
• Coordinates: 2672411..2675800 (+)
• Length: 1129 a.a.
• NCBI ID: WP_137373422.1
• Uniprot ID: -
• Organism: Vibrio gallaecicus strain CECT 7244
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2667411..2680800

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU78_RS11540	erpA	2667716..2668057 (-)	342	WP_137373426.1	iron-sulfur cluster insertion protein ErpA	-
OCU78_RS11545	hemL	2668354..2669649 (+)	1296	WP_137373425.1	glutamate-1-semialdehyde 2,1-aminomutase	-
OCU78_RS11550	-	2669970..2671055 (+)	1086	WP_137373424.1	AI-2E family transporter	-
OCU78_RS11555	rsmC	2671173..2672195 (+)	1023	WP_137373423.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
OCU78_RS11560	chiS	2672411..2675800 (+)	3390	WP_137373422.1	response regulator	Regulator
OCU78_RS11565	-	2676468..2678150 (+)	1683	WP_137373421.1	ABC transporter substrate-binding protein	-
OCU78_RS11570	-	2678321..2679307 (+)	987	WP_137373420.1	ABC transporter permease	-
OCU78_RS11575	-	2679310..2680335 (+)	1026	WP_137373419.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127025.49 Da
• Isoelectric Point: 5.5357

>NTDB_id=92054 OCU78_RS11560 WP_137373422.1 2672411..2675800(+) (chiS) [Vibrio gallaecicus strain CECT 7244]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTVIAFFFLQSHSADLQEQSTSHLVSVRDTKQQQVTDYLQAQESQVIGFVRS
ELAIASGGRFYGLVNAFQRLGLDIDEARENAQQRYIQGSGNQIKTSILPESSSYVGSERYRLLHKRYHQAYLELLKRSDF
DDILLVDINGNVTYSVYKNDNYGTNLTTGVYKDSNLGKTFTRLNQDVISKRKSNEDYTPIIVSDFELENGKQSAWLGAPI
IQQGYLHSYAMFRLPNNGITNLIADLNKSSNMHSLLVGSDHLPRSLAHSQESINLSLEVVDKALAGENAVGTFNNALGEP
TIAAYTPIKLKYATWALVVELPEKEAFSRIYQLEKIFIITMLTAIILVVVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
AMINMERKDEIGRLAVSFERMQRSIREKILLIKSQNQELEDNLKVIQKQNDDLQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPASQKYQLDIIINSGQRLTTLVDDLLDYHKMRYGSLDINKSAVDLSAATSLVLELSHHLLGNKPIRI
INQVPNDLALVSSDPQRLEQVMYNLVGNAIKYTTEGKIVISASIIDDNIRVQVVDTGQGIPAEYLDHIFEPLIQAGQDAN
RYRQGAGLGLSISRQLIELMGGSLYVSSQTMVGTTFSFTLPLASEEEIAATSPANPFSHFQAPEIIENHQLDACVIDENP
DGPLLIIADDEPVNLRVLDSFLKIEGYRVRTANDGPETIELIKKEKPELLLLDIMMPGMSGYQVCETLRKEFDHAQLPII
MLTALNQTEDRVRGFDVGANDYLSKPFNKQELAARITAHLSASKAEQRRVENDQLQQELKQRALVEANLLETQGRLLEQL
ESAPEAIICIRDDKHIRFANEAATKLFRRSQEQLKRSRADEIIAPKYLNVEQAHYCGDIDIYINDTRQHISTDILKLPQG
SGLDSMYIFNVGGGVNSARINNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRIADKAAGEGKNKQDIMREVLVEAMTN
SLDYWESVTGESKFAFAEKSQLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSIEFILEHCNEQSPERTHIEALR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=92054 OCU78_RS11560 WP_137373422.1 2672411..2675800(+) (chiS) [Vibrio gallaecicus strain CECT 7244]
ATGTTCAGATTCTATCGAAAACAGAAGTTTAAGCGCCTTCAAAACACCCTAATGCTTGCATTTCTTGTTCTTAGTATTAC
CCCTGTCACTGTCATCGCCTTCTTCTTTCTTCAATCACACAGTGCGGACCTACAAGAACAAAGTACCTCTCATTTAGTTT
CAGTGCGAGATACTAAGCAGCAGCAAGTCACCGATTACTTACAAGCACAAGAGTCACAGGTCATTGGATTTGTACGCTCC
GAGCTCGCCATAGCCAGTGGTGGACGTTTTTATGGATTAGTTAACGCATTTCAACGGCTTGGGCTAGATATAGATGAGGC
TAGAGAAAATGCACAACAACGATACATCCAAGGTTCTGGCAACCAGATAAAAACATCAATCCTTCCTGAATCAAGCAGTT
ACGTTGGAAGCGAACGCTACCGTCTGCTTCATAAGCGCTACCATCAAGCCTATCTTGAATTATTAAAACGCTCTGATTTT
GATGATATTTTACTTGTCGATATCAATGGTAACGTCACTTACTCCGTCTATAAGAATGACAATTACGGTACTAATTTAAC
AACCGGTGTATATAAAGACTCTAATTTAGGGAAAACATTTACGCGATTGAACCAAGACGTGATAAGCAAACGTAAGTCGA
ATGAAGACTATACGCCTATCATTGTTTCTGATTTTGAATTAGAAAATGGTAAGCAAAGTGCATGGCTCGGAGCGCCTATT
ATTCAACAAGGTTACCTGCACAGTTACGCAATGTTTAGGCTGCCAAACAATGGCATCACAAACCTTATCGCCGACCTCAA
CAAATCATCAAATATGCATTCGCTTTTAGTGGGTAGTGACCACTTACCTCGTAGTTTAGCTCATAGCCAAGAGTCGATAA
ATTTAAGCCTTGAGGTTGTAGATAAAGCCTTAGCCGGTGAAAATGCAGTAGGTACTTTTAATAATGCACTAGGTGAACCG
ACTATTGCAGCATACACCCCAATTAAGCTTAAATATGCAACCTGGGCTCTTGTGGTGGAACTACCTGAAAAAGAAGCTTT
TTCTCGAATATATCAACTCGAAAAAATATTTATTATCACCATGCTTACTGCCATTATTTTGGTAGTAGTTGCTTCTCACT
ACCTTTCTAATTTCATTACTTCCCCACTTCTAAAGTTAACTTGGGCTGCAGAAAAAGTATCGGCTGGTGATTTGGATGAA
GCAATGATCAACATGGAGCGAAAAGATGAGATTGGACGCCTTGCAGTAAGCTTTGAAAGAATGCAGCGCTCTATTCGCGA
AAAAATACTCCTGATAAAAAGCCAAAACCAAGAACTTGAGGACAACTTAAAAGTCATCCAAAAACAGAATGACGACCTTC
AACTTGCCAATAAGCTTAAAGATGAATTCTTAGCCACAACATCTCATGAGTTAAGAACTCCATTACACGGTATGGTCGGT
ATCGCTGAAGCTTTGATCTCAGGAGCAAACGGTCCTATCCCTGCGAGTCAAAAGTACCAACTCGACATTATTATTAACAG
CGGACAACGCTTAACCACCTTGGTCGATGATCTTCTGGACTATCACAAGATGCGCTATGGCAGCTTAGACATCAACAAAT
CAGCCGTAGACCTTTCAGCAGCCACCAGCTTAGTTTTAGAACTTTCCCATCACTTATTGGGCAATAAACCAATTCGCATT
ATTAACCAAGTACCAAATGACCTAGCACTTGTATCATCAGATCCTCAGCGACTTGAACAGGTGATGTATAACTTAGTTGG
CAACGCCATTAAATATACTACTGAAGGTAAGATTGTCATTTCAGCCAGTATTATTGATGACAACATTCGCGTGCAAGTTG
TCGATACTGGGCAAGGAATTCCTGCGGAATATTTAGACCATATTTTCGAACCGCTCATTCAAGCTGGCCAAGATGCAAAC
CGCTATAGACAAGGTGCAGGTCTAGGATTATCAATTAGCCGCCAACTTATCGAACTAATGGGTGGCTCACTGTATGTAAG
CAGCCAAACCATGGTAGGGACTACCTTTAGCTTTACCCTTCCACTTGCATCCGAAGAAGAAATAGCGGCAACTAGCCCTG
CTAATCCTTTTTCCCACTTCCAAGCACCTGAAATTATTGAAAACCATCAGCTAGATGCCTGTGTCATTGATGAAAACCCT
GATGGTCCGTTATTAATTATTGCCGACGACGAGCCTGTAAACCTGAGAGTTCTGGATAGCTTCTTAAAAATAGAAGGCTA
CAGAGTTCGTACAGCAAATGATGGCCCTGAAACTATTGAACTAATAAAGAAAGAAAAACCTGAACTTTTATTGCTCGATA
TCATGATGCCAGGAATGAGTGGCTATCAAGTTTGTGAAACTCTCAGAAAAGAATTCGATCACGCGCAACTGCCTATCATA
ATGCTCACGGCTCTAAATCAAACAGAAGACCGCGTAAGAGGTTTTGATGTTGGTGCAAATGACTACTTATCAAAACCATT
TAATAAACAGGAACTTGCAGCAAGGATTACTGCACATTTATCCGCAAGCAAAGCTGAACAACGCCGAGTAGAAAATGATC
AGCTGCAGCAAGAGCTGAAGCAGAGAGCATTGGTTGAAGCGAACCTGTTAGAAACACAAGGAAGGTTACTGGAACAGCTA
GAGTCCGCGCCAGAGGCAATTATTTGTATTCGAGATGATAAGCACATCCGTTTCGCGAACGAAGCTGCGACCAAACTATT
CAGAAGAAGCCAAGAACAACTGAAACGCTCTAGAGCTGATGAAATTATTGCGCCGAAATACTTAAATGTGGAACAGGCGC
ACTATTGTGGCGACATCGATATATACATAAATGATACAAGGCAGCATATATCAACGGATATTCTCAAGCTTCCACAAGGC
TCAGGGTTAGATTCCATGTATATTTTCAATGTTGGAGGCGGGGTTAATTCAGCTCGAATTAATAACCTAGAGACAGCTGT
AGAGGCGCTTTCTAGCTATGCATTCGAAGGGGACAAAGATAAATTACAGCAACTTAAAGAGCTTGGTGGAGAATTTACTC
GCATTGCGGATAAAGCCGCTGGTGAAGGTAAAAATAAGCAAGACATCATGCGAGAAGTCTTAGTTGAAGCTATGACTAAC
TCACTAGATTACTGGGAATCAGTAACTGGTGAAAGTAAGTTCGCTTTTGCGGAGAAGAGCCAACTATGGCGAGTCTATCT
AGATAGAAGCACTTTACAAACTAGAACACTAGATAAGTACTTGCGCGTAGAAACGCTGCCTAAGACTCCTAGATGGCGTA
CAGTGCTCAGTTCAATTGAATTTATTCTAGAGCACTGTAATGAACAAAGCCCTGAGCGTACCCACATCGAAGCACTTAGA
GATAAGCTCCAAAAACTACTGACTAGCTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (726-836)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.351	100	0.764