Detailed information NTG0919807

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: VO180_RS06930
• Genome accession: NZ_CP141826
• Coordinates: 1381495..1383873 (+)
• Length: 792 a.a.
• NCBI ID: WP_324636594.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain XHA16
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1376495..1388873

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VO180_RS06905 (VO180_06905)	-	1376579..1377847 (-)	1269	WP_324636589.1	replication-associated recombination protein A	-
VO180_RS06910 (VO180_06910)	cymR	1378042..1378458 (+)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
VO180_RS06915 (VO180_06915)	-	1378477..1379616 (+)	1140	WP_007612815.1	cysteine desulfurase family protein	-
VO180_RS06920 (VO180_06920)	mnmA	1379653..1380768 (+)	1116	WP_012118077.1	tRNA 2-thiouridine(34) synthase MnmA	-
VO180_RS06925 (VO180_06925)	-	1380856..1381476 (+)	621	WP_088461189.1	tetratricopeptide repeat protein	-
VO180_RS06930 (VO180_06930)	recD2	1381495..1383873 (+)	2379	WP_324636594.1	ATP-dependent RecD-like DNA helicase	Machinery gene
VO180_RS06935 (VO180_06935)	-	1383992..1384450 (+)	459	WP_007408205.1	PRC-barrel domain-containing protein	-
VO180_RS06940 (VO180_06940)	-	1384463..1384654 (+)	192	WP_003152738.1	hypothetical protein	-
VO180_RS06945 (VO180_06945)	-	1384676..1384807 (+)	132	WP_003152741.1	YrzQ family protein	-
VO180_RS06950 (VO180_06950)	-	1384843..1385499 (-)	657	WP_012118075.1	amino acid ABC transporter permease	-
VO180_RS06955 (VO180_06955)	-	1385518..1386168 (-)	651	WP_007408207.1	amino acid ABC transporter permease	-
VO180_RS06960 (VO180_06960)	-	1386225..1387052 (-)	828	WP_324636598.1	transporter substrate-binding domain-containing protein	-
VO180_RS06965 (VO180_06965)	-	1387073..1387801 (-)	729	WP_324636600.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 792 a.a.
• Molecular weight: 88405.05 Da
• Isoelectric Point: 4.9490

>NTDB_id=919807 VO180_RS06930 WP_324636594.1 1381495..1383873(+) (recD2) [Bacillus velezensis strain XHA16]
MDQLNIEEQPYVKGVIHTVIYHNDTNLYTVLKVKVAETSEAIEDKVVSVTGYFPLLQEDETYTFYGKTATHPKFGLQFQA
EHFKKEIPTTKEGIIHYLSSDLFEGIGKKTAEEIVKKLGDGALNKILTDASVLYDVPKMSKKKADKLAGELQRHQGLEQI
MISLNQYGFGPQLSMKIYQAYETETLEKIQENPYQLVKDVEGIGFVKADELGGKMGLSGNHPERIKAAILYTIESTCLSE
GHTYIETKQLIINTQTLLNQSAEGGRVTEMDAADGIIALGESKDIVIEGERCYFPSLFYAEQNVAKRVLDIAAQTEYADQ
FPESEFLLALGELEERMNVQYAPSQKDAIQKALSSPMLLLTGGPGTGKTTVIKGIVELYSELHGVSLDPGDYKKDEAFPV
LLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTYNEDQPIEGKLIIIDEASMLDIWLASHLFKALPKHIQLIVVGD
EDQLPSVGPGQVLRDLLASEVLPTVRLTDIYRQAEGSSIVELAHDMKKGLLPKGLTAPTKDRSFIRCNSSQIKEVVDQVV
SNALKKGYTSRDIQVLAPMYRGKAGINELNMLLQDIMNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEIV
SIFYAKENTEKEDMVVVSFDGNEITFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKF
LILCGEEEALEWGVKNNDATVRQTSLRNRLTEQNEEMDAELAALQKELPFSVYDANIGMEGITPFDFMEEKA

Nucleotide

• Length: 2379 bp

>NTDB_id=919807 VO180_RS06930 WP_324636594.1 1381495..1383873(+) (recD2) [Bacillus velezensis strain XHA16]
GTGGATCAGCTGAACATCGAGGAACAGCCGTATGTAAAAGGCGTCATTCATACGGTCATTTATCATAATGACACCAACCT
GTATACAGTGCTGAAAGTCAAGGTTGCAGAAACGTCTGAGGCGATCGAAGACAAGGTCGTATCCGTAACGGGCTACTTCC
CTCTGCTGCAAGAAGATGAGACCTACACATTTTACGGAAAAACCGCCACGCATCCTAAGTTCGGCCTGCAATTTCAGGCT
GAGCACTTTAAAAAAGAAATTCCGACCACAAAAGAAGGGATCATTCACTATTTATCAAGTGATCTGTTTGAAGGAATCGG
AAAAAAAACGGCGGAAGAAATCGTCAAAAAGCTCGGAGATGGCGCGCTCAATAAAATTCTGACGGATGCGTCGGTGCTTT
ACGATGTGCCGAAAATGTCGAAAAAGAAAGCGGATAAGCTTGCCGGAGAGCTGCAGCGGCATCAGGGGCTTGAGCAGATT
ATGATCTCTCTGAACCAATACGGTTTCGGGCCTCAGCTATCCATGAAAATATATCAGGCCTACGAAACGGAAACACTGGA
GAAAATTCAGGAAAATCCTTATCAGCTTGTAAAAGACGTTGAAGGCATCGGCTTTGTGAAAGCTGACGAGCTGGGCGGAA
AAATGGGTCTGTCAGGAAACCACCCGGAGCGGATCAAAGCGGCTATCTTATATACAATTGAATCGACCTGTCTTTCAGAG
GGCCATACGTACATAGAAACAAAGCAGCTGATAATCAATACGCAAACGCTCCTGAATCAGTCAGCTGAAGGCGGCCGCGT
CACGGAAATGGATGCGGCTGACGGCATCATCGCCCTCGGGGAGAGTAAGGATATCGTCATAGAAGGAGAACGCTGCTATT
TTCCGTCCTTGTTTTACGCCGAACAAAATGTCGCAAAACGCGTGCTCGACATTGCGGCTCAGACGGAGTATGCCGATCAA
TTTCCTGAATCGGAATTTCTGCTTGCACTCGGTGAACTGGAAGAACGGATGAATGTTCAATACGCACCAAGCCAAAAGGA
TGCCATTCAAAAAGCGCTGTCTTCACCGATGCTTTTACTGACCGGAGGACCTGGGACGGGGAAAACGACCGTTATTAAAG
GAATCGTGGAATTATACAGTGAACTGCACGGAGTATCGCTTGACCCCGGTGATTATAAAAAAGACGAGGCGTTCCCGGTG
CTGCTTGCCGCGCCGACGGGAAGAGCCGCAAAACGGATGAGCGAATCTACGGGTCTGCCGGCTGTTACGATACACAGGCT
GCTCGGCTGGAATGGCGCTGAAGGCTTTACCTACAATGAAGATCAGCCGATAGAAGGGAAACTGATCATTATAGACGAAG
CGAGTATGCTCGATATCTGGCTCGCCAGCCATTTGTTTAAGGCGCTTCCTAAGCACATTCAGCTCATTGTCGTCGGTGAT
GAAGACCAGCTTCCTTCAGTAGGACCGGGGCAGGTGCTCAGAGACCTTTTGGCTTCTGAGGTGCTGCCGACCGTGCGCCT
GACAGATATTTACCGTCAGGCTGAAGGATCATCCATTGTGGAACTTGCGCATGATATGAAAAAAGGACTGCTTCCGAAGG
GGCTGACCGCGCCGACTAAGGACCGCTCATTTATCCGCTGTAATTCTTCACAGATTAAAGAAGTCGTGGATCAGGTCGTC
TCGAACGCGTTAAAAAAGGGGTATACCTCCAGGGATATTCAAGTGCTTGCCCCGATGTACAGGGGAAAAGCGGGAATTAA
CGAGCTGAATATGCTTCTTCAAGACATCATGAATCCGCCGAAAGAAAAAAGGCGGGAGCTGAAATTCGGTGATGTCGTCT
ACAGGACGGGCGATAAAATATTACAGCTTGTCAACCAGCCGGAAAACAATGTGTTTAACGGCGATATTGGCGAAATCGTA
TCCATTTTTTATGCCAAAGAAAATACGGAAAAAGAAGACATGGTCGTCGTCTCATTTGACGGCAACGAAATCACCTTTAC
GAAAAAGGATTTCAGCCAGTTTACCCACGCTTACTGCTGTTCGATTCATAAGTCGCAGGGGAGCGAATTCCCGATTGTCG
TCCTGCCTGTCGTCAAAGGCTACTATCGAATGCTCAGGAGAAATCTGCTTTATACCGCCATAACAAGGGCGAAAAAATTT
CTGATTCTTTGCGGAGAAGAAGAAGCGCTTGAATGGGGCGTCAAAAACAATGATGCCACCGTCAGACAGACGTCGCTTAG
AAACAGGCTCACAGAGCAGAATGAAGAGATGGATGCAGAACTGGCCGCCCTGCAAAAAGAGCTGCCGTTCAGTGTATATG
ATGCGAACATCGGAATGGAAGGCATCACGCCGTTTGACTTTATGGAAGAAAAAGCGTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-659)

• Helix-hairpin-helix containing domain (HHH_RecD2) (154-244)

• AAA domain (AAA_30) (341-548)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (676-724)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	88.748	99.874	0.886