Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   VF946_RS10540 Genome accession   NZ_CP141824
Coordinates   2084767..2086026 (-) Length   419 a.a.
NCBI ID   WP_012027845.1    Uniprot ID   A0A0Z8VH60
Organism   Streptococcus suis strain HB18     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2079767..2091026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VF946_RS10515 dhaK 2080022..2081011 (+) 990 WP_023371629.1 dihydroxyacetone kinase subunit DhaK -
  VF946_RS10520 dhaL 2081022..2081597 (+) 576 WP_023371632.1 dihydroxyacetone kinase subunit DhaL -
  VF946_RS10525 dhaM 2081594..2081968 (+) 375 WP_023371633.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  VF946_RS10530 - 2081978..2082688 (+) 711 WP_014736436.1 MIP/aquaporin family protein -
  VF946_RS10535 - 2082768..2084630 (-) 1863 WP_238716836.1 proline--tRNA ligase -
  VF946_RS10540 eeP 2084767..2086026 (-) 1260 WP_012027845.1 M50 family metallopeptidase Regulator
  VF946_RS10545 - 2086036..2086842 (-) 807 WP_012027846.1 phosphatidate cytidylyltransferase -
  VF946_RS10550 - 2086852..2087607 (-) 756 WP_012775352.1 isoprenyl transferase -
  VF946_RS10555 yajC 2087721..2088044 (-) 324 WP_012775696.1 preprotein translocase subunit YajC -
  VF946_RS10560 - 2088154..2089446 (-) 1293 WP_012775353.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44889.21 Da        Isoelectric Point: 5.6974

>NTDB_id=919777 VF946_RS10540 WP_012027845.1 2084767..2086026(-) (eeP) [Streptococcus suis strain HB18]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFILLFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=919777 VF946_RS10540 WP_012027845.1 2084767..2086026(-) (eeP) [Streptococcus suis strain HB18]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTCGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAAGGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCCTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTCGAGGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGATGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAATAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCGGGTCCCATGAATAACTTTATTTTAGGGATTCTAGTATT
TATTCTTTTGTTCTTCATGCAAGGAGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCTGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGTAAAGCAGCAACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTCGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCCTATCGAATTGGTATTTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTAACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCAGCTGAATTTGGTTTGGTTTCTGTATT
GGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0Z8VH60

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65

100

0.652

  eeP Streptococcus thermophilus LMD-9

65

100

0.652