Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | VF946_RS00405 | Genome accession | NZ_CP141824 |
| Coordinates | 69961..70227 (+) | Length | 88 a.a. |
| NCBI ID | WP_014635810.1 | Uniprot ID | A0A2K1SXG9 |
| Organism | Streptococcus suis strain HB18 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 64961..75227
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VF946_RS00370 | - | 64969..66140 (+) | 1172 | Protein_53 | competence/damage-inducible protein A | - |
| VF946_RS00375 | recA | 66192..67340 (+) | 1149 | WP_023369045.1 | recombinase RecA | Machinery gene |
| VF946_RS00380 | spx | 67576..67974 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| VF946_RS00385 | - | 68074..68340 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
| VF946_RS00390 | ruvX | 68340..68759 (+) | 420 | WP_002939356.1 | Holliday junction resolvase RuvX | - |
| VF946_RS00395 | - | 68771..69103 (+) | 333 | WP_023369048.1 | DUF1292 domain-containing protein | - |
| VF946_RS00400 | - | 69310..69888 (+) | 579 | WP_012774895.1 | nucleotidyltransferase family protein | - |
| VF946_RS00405 | comX/sigX | 69961..70227 (+) | 267 | WP_014635810.1 | hypothetical protein | Regulator |
| VF946_RS00410 | rpsJ | 70550..70858 (+) | 309 | WP_238716866.1 | 30S ribosomal protein S10 | - |
| VF946_RS00415 | rplC | 70995..71621 (+) | 627 | WP_011921686.1 | 50S ribosomal protein L3 | - |
| VF946_RS00420 | rplD | 71646..72269 (+) | 624 | WP_004195490.1 | 50S ribosomal protein L4 | - |
| VF946_RS00425 | - | 72269..72568 (+) | 300 | WP_004195491.1 | 50S ribosomal protein L23 | - |
| VF946_RS00430 | rplB | 72586..73419 (+) | 834 | WP_002936663.1 | 50S ribosomal protein L2 | - |
| VF946_RS00435 | rpsS | 73670..73951 (+) | 282 | WP_000533766.1 | 30S ribosomal protein S19 | - |
| VF946_RS00440 | rplV | 73969..74313 (+) | 345 | WP_002936662.1 | 50S ribosomal protein L22 | - |
| VF946_RS00445 | rpsC | 74326..74979 (+) | 654 | WP_002936661.1 | 30S ribosomal protein S3 | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 10670.50 Da Isoelectric Point: 9.1949
>NTDB_id=919732 VF946_RS00405 WP_014635810.1 69961..70227(+) (comX/sigX) [Streptococcus suis strain HB18]
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
Nucleotide
Download Length: 267 bp
>NTDB_id=919732 VF946_RS00405 WP_014635810.1 69961..70227(+) (comX/sigX) [Streptococcus suis strain HB18]
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX/sigX | Streptococcus suis D9 |
72.603 |
82.955 |
0.602 |
| comX/sigX | Streptococcus suis isolate S10 |
71.233 |
82.955 |
0.591 |
| comX/sigX | Streptococcus suis P1/7 |
71.233 |
82.955 |
0.591 |