Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   VNN51_RS01520 Genome accession   NZ_CP141727
Coordinates   307725..308408 (-) Length   227 a.a.
NCBI ID   WP_213432805.1    Uniprot ID   -
Organism   Lactococcus formosensis strain M20011502 FF20a2     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 302725..313408
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VNN51_RS01500 (VNN51_01500) - 303079..304290 (-) 1212 WP_213432802.1 cysteine desulfurase -
  VNN51_RS01505 (VNN51_01505) sufD 304290..305546 (-) 1257 WP_253008132.1 Fe-S cluster assembly protein SufD -
  VNN51_RS01510 (VNN51_01510) sufC 305617..306387 (-) 771 WP_017368843.1 Fe-S cluster assembly ATPase SufC -
  VNN51_RS01515 (VNN51_01515) - 306465..307721 (-) 1257 WP_213432804.1 MraY family glycosyltransferase -
  VNN51_RS01520 (VNN51_01520) mecA 307725..308408 (-) 684 WP_213432805.1 adaptor protein MecA Regulator
  VNN51_RS01525 (VNN51_01525) - 308656..309564 (+) 909 WP_279360508.1 diacylglycerol kinase family lipid kinase -
  VNN51_RS01530 (VNN51_01530) rpoC 309656..313303 (-) 3648 WP_017368839.1 DNA-directed RNA polymerase subunit beta' -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26237.38 Da        Isoelectric Point: 3.9817

>NTDB_id=919017 VNN51_RS01520 WP_213432805.1 307725..308408(-) (mecA) [Lactococcus formosensis strain M20011502 FF20a2]
MQYEEINEKTIKISLTFQDLVDHDVKLSDFFTNQSMVENLFYELVEELGLEERFSSGLLTFQIQPFPKGVNIIVTEENID
IDPNNLPDDPEEFEQLMTDFFGRVEDLKQNGGAMADTSTTETKETQVENKPDPDFVFYSLEFENMSQLLMAVKNVKIDAE
ESELYSYQDKFYLIILDNQKSKGKTAVSSMRARMLEYGQETPNSRETLQEYGEILINTRALEVLSKI

Nucleotide


Download         Length: 684 bp        

>NTDB_id=919017 VNN51_RS01520 WP_213432805.1 307725..308408(-) (mecA) [Lactococcus formosensis strain M20011502 FF20a2]
ATGCAATACGAAGAAATAAACGAAAAAACAATAAAGATTAGCCTAACCTTCCAAGATTTGGTTGATCATGATGTCAAACT
CTCTGATTTTTTTACGAACCAATCAATGGTGGAAAATCTTTTTTATGAGTTGGTAGAAGAGCTAGGACTTGAGGAACGGT
TCTCGTCGGGACTTTTAACCTTCCAAATTCAACCTTTCCCTAAAGGGGTGAATATTATTGTTACTGAAGAAAACATCGAT
ATTGATCCCAATAATCTTCCAGATGATCCTGAAGAATTTGAGCAGCTCATGACGGATTTCTTTGGACGTGTGGAAGATTT
AAAACAAAATGGCGGAGCAATGGCAGATACAAGTACAACTGAAACTAAAGAAACACAAGTAGAAAACAAACCAGACCCAG
ATTTTGTCTTCTATTCCCTAGAATTTGAAAATATGTCTCAACTTTTGATGGCAGTAAAAAATGTTAAAATCGATGCAGAA
GAGTCCGAACTTTATAGCTATCAAGACAAGTTTTACTTGATTATTTTGGATAATCAAAAATCAAAAGGAAAGACAGCTGT
AAGTTCCATGCGTGCCCGAATGTTAGAGTACGGACAGGAAACGCCCAACAGTCGCGAAACACTACAAGAATATGGCGAGA
TATTGATCAACACTCGTGCTTTGGAAGTTCTCTCAAAAATTTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-224)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. cremoris KW2

53.814

100

0.559
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

53.814

100

0.559