Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   VNN32_RS03165 Genome accession   NZ_CP141703
Coordinates   591715..592962 (-) Length   415 a.a.
NCBI ID   WP_086583290.1    Uniprot ID   -
Organism   Lactococcus petauri strain R21-74 AL-1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 586715..597962
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VNN32_RS03150 (VNN32_03150) - 587381..587890 (-) 510 WP_311792757.1 hypothetical protein -
  VNN32_RS03155 (VNN32_03155) - 588260..588661 (-) 402 WP_155392869.1 hypothetical protein -
  VNN32_RS03160 (VNN32_03160) - 589838..591688 (-) 1851 WP_311792758.1 proline--tRNA ligase -
  VNN32_RS03165 (VNN32_03165) eeP 591715..592962 (-) 1248 WP_086583290.1 RIP metalloprotease RseP Regulator
  VNN32_RS03170 (VNN32_03170) - 593139..593933 (-) 795 WP_019291563.1 phosphatidate cytidylyltransferase -
  VNN32_RS03175 (VNN32_03175) - 593930..594667 (-) 738 WP_019292981.1 isoprenyl transferase -
  VNN32_RS03180 (VNN32_03180) yajC 594867..595202 (-) 336 WP_014025468.1 preprotein translocase subunit YajC -
  VNN32_RS03185 (VNN32_03185) - 595277..595924 (-) 648 WP_046401302.1 DNA alkylation repair protein -
  VNN32_RS03190 (VNN32_03190) rlmH 595921..596400 (-) 480 WP_019291566.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  VNN32_RS03195 (VNN32_03195) htrA 596704..597921 (+) 1218 WP_019291567.1 trypsin-like peptidase domain-containing protein Regulator

Sequence


Protein


Download         Length: 415 a.a.        Molecular weight: 45089.51 Da        Isoelectric Point: 5.8072

>NTDB_id=918569 VNN32_RS03165 WP_086583290.1 591715..592962(-) (eeP) [Lactococcus petauri strain R21-74 AL-1]
MIQTLVTFIIVFGIIVVVHEYGHLFFAKRAGILVREFSIGMGPKIFAHQAKDGTFYSIRILPLGGYVRMAGWGDDTTEIK
KGTPASLMIVENQVVKINLSERVTLENSVPMLVTEYDFEEALFIEGEVFGETKRYSVDHDATIIEADGTELRIAPRDVQY
QSASVLGKILTNFAGPLNNFILGIIAFIIITFMQGGVPSNTNQIGQVQSGTPAYSAGLQSKDKIQAVNGEKTNNWEEVVQ
RIGANDGSEIKLDIERAGATKTLELKPEKIDGRYRIGITQTIKTGFLDKLTGGFTQAANATTLIFKALGNLIAQPSLDKL
GGPVAIYDLSGQAAREGLLSVIALLAMLSINLGIVNLIPIPVLDGGKIVLNIVEALRGKPLSQEKEGILTLVGLVFMVVL
MIAVTWNDILRAFIR

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=918569 VNN32_RS03165 WP_086583290.1 591715..592962(-) (eeP) [Lactococcus petauri strain R21-74 AL-1]
TTGATTCAAACATTGGTAACATTTATCATTGTCTTTGGTATTATTGTTGTTGTACATGAGTATGGTCATCTATTCTTTGC
TAAGCGCGCGGGGATTTTAGTCCGCGAGTTTTCCATTGGAATGGGCCCCAAAATTTTTGCACATCAAGCCAAAGATGGCA
CGTTTTATAGCATTCGTATACTTCCTCTTGGAGGTTATGTCCGCATGGCGGGCTGGGGCGATGATACAACGGAAATAAAA
AAAGGAACCCCGGCATCTTTGATGATTGTTGAAAATCAGGTGGTTAAAATTAATCTTTCTGAGCGGGTGACTTTGGAAAA
TAGTGTCCCCATGCTGGTCACTGAATACGATTTTGAAGAAGCACTTTTCATCGAAGGAGAAGTTTTTGGTGAAACAAAAC
GTTATTCAGTTGACCATGATGCAACAATTATCGAAGCGGATGGCACGGAACTTCGTATCGCTCCACGCGACGTACAATAT
CAAAGTGCCAGCGTTCTCGGCAAGATTTTAACAAATTTTGCTGGTCCTTTAAATAACTTTATTTTAGGGATTATAGCTTT
TATTATCATCACTTTTATGCAAGGTGGTGTACCTTCTAATACAAATCAAATCGGACAAGTCCAATCTGGCACCCCTGCTT
ATTCGGCAGGTTTACAGTCAAAGGATAAAATCCAAGCAGTCAATGGTGAAAAAACCAATAATTGGGAAGAAGTTGTCCAA
AGGATCGGTGCAAATGATGGCAGTGAAATCAAGCTGGATATTGAACGTGCAGGTGCGACGAAGACACTGGAGCTCAAGCC
AGAAAAAATTGACGGAAGATACCGCATTGGTATCACTCAAACAATCAAAACAGGCTTTTTAGATAAACTAACGGGTGGCT
TTACTCAGGCTGCTAACGCAACAACGTTGATATTTAAAGCTTTAGGTAACCTCATTGCACAGCCAAGTCTTGATAAACTT
GGTGGACCCGTTGCCATTTATGATTTAAGTGGGCAAGCAGCCCGAGAAGGCCTATTATCTGTTATCGCTTTACTTGCCAT
GCTCTCAATTAATCTGGGAATCGTAAATTTAATTCCAATCCCCGTCCTTGACGGAGGGAAAATTGTCCTCAATATTGTTG
AGGCCCTACGAGGCAAACCACTTTCACAAGAAAAAGAAGGAATCTTAACACTTGTTGGTCTTGTCTTCATGGTGGTCTTG
ATGATTGCTGTGACTTGGAATGATATCCTCCGAGCCTTTATTAGATAA

Domains


Predicted by InterproScan.

(7-400)

(204-256)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.086

100

0.566

  eeP Streptococcus thermophilus LMD-9

55.847

100

0.564