Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   VNN52_RS01535 Genome accession   NZ_CP141701
Coordinates   306821..307504 (-) Length   227 a.a.
NCBI ID   WP_019292408.1    Uniprot ID   A0A139MDU9
Organism   Lactococcus petauri strain M18012501 FF2g6     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 301821..312504
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VNN52_RS01515 (VNN52_01515) - 302174..303385 (-) 1212 WP_019292404.1 cysteine desulfurase -
  VNN52_RS01520 (VNN52_01520) sufD 303385..304641 (-) 1257 WP_019292405.1 Fe-S cluster assembly protein SufD -
  VNN52_RS01525 (VNN52_01525) sufC 304713..305483 (-) 771 WP_019292406.1 Fe-S cluster assembly ATPase SufC -
  VNN52_RS01530 (VNN52_01530) - 305561..306817 (-) 1257 WP_019292407.1 glycosyltransferase family 4 protein -
  VNN52_RS01535 (VNN52_01535) mecA 306821..307504 (-) 684 WP_019292408.1 adaptor protein MecA Regulator
  VNN52_RS01540 (VNN52_01540) - 307751..308659 (+) 909 WP_019292409.1 diacylglycerol kinase family protein -
  VNN52_RS01545 (VNN52_01545) rpoC 308752..312399 (-) 3648 WP_019292410.1 DNA-directed RNA polymerase subunit beta' -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26254.39 Da        Isoelectric Point: 4.0031

>NTDB_id=918524 VNN52_RS01535 WP_019292408.1 306821..307504(-) (mecA) [Lactococcus petauri strain M18012501 FF2g6]
MQYEEINEKTIKISLTFQDLVDHDVKLSDFFTNQSMVENLFYELVEELGLEERFSSGLLTFQIQPFPKGVNIIVTEENID
IDPNNLPDDPEEFEQLMTDFFGRVEDLKQNGGTMADTSTTETKETKVENKPDPDFVFYSLEFENMSQLLTAVKNVKIDAE
ESELYSYEDKFYLIILDNQKSKGKTAVSSMRARMLEYGQETINSRETLQEYGEILINTRALEVLSKI

Nucleotide


Download         Length: 684 bp        

>NTDB_id=918524 VNN52_RS01535 WP_019292408.1 306821..307504(-) (mecA) [Lactococcus petauri strain M18012501 FF2g6]
ATGCAATATGAAGAAATAAACGAAAAAACGATAAAGATTAGCCTAACCTTTCAAGATTTGGTTGATCATGATGTCAAACT
CTCTGATTTTTTTACGAACCAGTCAATGGTTGAAAATCTTTTTTATGAATTAGTAGAAGAACTAGGACTTGAGGAAAGGT
TCTCATCAGGACTTTTAACTTTCCAAATTCAACCTTTCCCTAAAGGGGTGAATATTATTGTTACTGAAGAAAATATTGAT
ATTGATCCCAATAATCTCCCTGATGATCCCGAAGAATTTGAGCAGCTTATGACGGATTTCTTTGGACGTGTGGAAGATTT
AAAACAAAATGGCGGAACAATGGCAGATACAAGTACAACTGAAACAAAAGAAACAAAAGTAGAAAATAAACCAGATCCAG
ATTTTGTCTTCTATTCTCTAGAATTTGAAAACATGTCTCAACTTTTGACAGCAGTAAAAAATGTTAAAATTGATGCAGAG
GAATCTGAACTTTATAGCTATGAAGATAAGTTTTATTTGATTATTTTGGACAATCAAAAGTCAAAAGGAAAGACAGCAGT
AAGTTCGATGCGTGCCCGAATGTTAGAATACGGACAGGAAACAATCAACAGTCGCGAAACACTACAAGAATACGGCGAGA
TACTAATCAATACACGTGCTTTGGAAGTTCTCTCAAAAATTTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-224)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A139MDU9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. cremoris KW2

54.077

100

0.555
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

54.077

100

0.555