Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   VNN34_RS04980 Genome accession   NZ_CP141696
Coordinates   978261..979508 (+) Length   415 a.a.
NCBI ID   WP_086583290.1    Uniprot ID   -
Organism   Lactococcus petauri strain S69-A     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 973261..984508
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VNN34_RS04950 (VNN34_04950) htrA 973302..974519 (-) 1218 WP_019291567.1 trypsin-like peptidase domain-containing protein Regulator
  VNN34_RS04955 (VNN34_04955) rlmH 974823..975302 (+) 480 WP_019291566.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  VNN34_RS04960 (VNN34_04960) - 975299..975946 (+) 648 WP_173817272.1 DNA alkylation repair protein -
  VNN34_RS04965 (VNN34_04965) yajC 976021..976356 (+) 336 WP_019292982.1 preprotein translocase subunit YajC -
  VNN34_RS04970 (VNN34_04970) - 976556..977293 (+) 738 WP_019292981.1 isoprenyl transferase -
  VNN34_RS04975 (VNN34_04975) - 977290..978084 (+) 795 WP_019291563.1 phosphatidate cytidylyltransferase -
  VNN34_RS04980 (VNN34_04980) eeP 978261..979508 (+) 1248 WP_086583290.1 RIP metalloprotease RseP Regulator
  VNN34_RS04985 (VNN34_04985) - 979535..981385 (+) 1851 WP_017369962.1 proline--tRNA ligase -
  VNN34_RS04990 (VNN34_04990) - 981853..982227 (+) 375 WP_019291560.1 hypothetical protein -

Sequence


Protein


Download         Length: 415 a.a.        Molecular weight: 45089.51 Da        Isoelectric Point: 5.8072

>NTDB_id=918321 VNN34_RS04980 WP_086583290.1 978261..979508(+) (eeP) [Lactococcus petauri strain S69-A]
MIQTLVTFIIVFGIIVVVHEYGHLFFAKRAGILVREFSIGMGPKIFAHQAKDGTFYSIRILPLGGYVRMAGWGDDTTEIK
KGTPASLMIVENQVVKINLSERVTLENSVPMLVTEYDFEEALFIEGEVFGETKRYSVDHDATIIEADGTELRIAPRDVQY
QSASVLGKILTNFAGPLNNFILGIIAFIIITFMQGGVPSNTNQIGQVQSGTPAYSAGLQSKDKIQAVNGEKTNNWEEVVQ
RIGANDGSEIKLDIERAGATKTLELKPEKIDGRYRIGITQTIKTGFLDKLTGGFTQAANATTLIFKALGNLIAQPSLDKL
GGPVAIYDLSGQAAREGLLSVIALLAMLSINLGIVNLIPIPVLDGGKIVLNIVEALRGKPLSQEKEGILTLVGLVFMVVL
MIAVTWNDILRAFIR

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=918321 VNN34_RS04980 WP_086583290.1 978261..979508(+) (eeP) [Lactococcus petauri strain S69-A]
TTGATTCAAACATTGGTAACATTTATCATTGTCTTTGGTATTATTGTTGTTGTACATGAGTATGGTCATCTGTTCTTTGC
TAAGCGCGCGGGGATTTTAGTCCGCGAGTTTTCCATTGGAATGGGCCCCAAAATTTTTGCACATCAAGCCAAAGATGGTA
CGTTTTATAGCATTCGTATACTTCCTCTTGGAGGTTATGTCCGCATGGCGGGCTGGGGCGATGATACAACGGAAATAAAA
AAAGGAACCCCGGCATCTTTGATGATTGTTGAAAATCAGGTGGTTAAAATTAATCTTTCTGAGCGGGTGACTTTGGAAAA
TAGTGTCCCCATGCTGGTCACTGAATACGATTTTGAAGAAGCACTTTTCATCGAAGGAGAAGTTTTTGGTGAAACAAAAC
GTTATTCAGTTGACCATGATGCAACAATTATCGAAGCGGATGGCACGGAACTTCGTATCGCTCCACGAGACGTACAATAT
CAAAGTGCCAGCGTTCTCGGCAAGATTTTAACAAATTTTGCTGGTCCTTTAAATAACTTTATTTTAGGGATTATAGCTTT
TATTATCATCACTTTTATGCAAGGTGGTGTACCTTCTAATACAAATCAAATCGGACAAGTCCAATCTGGCACCCCTGCTT
ATTCGGCAGGTTTACAGTCAAAGGATAAAATCCAAGCAGTCAATGGTGAAAAAACCAATAACTGGGAAGAAGTTGTCCAA
AGGATTGGTGCAAATGATGGCAGTGAAATCAAGCTGGATATCGAACGTGCAGGTGCGACGAAGACACTGGAGCTCAAGCC
AGAAAAAATTGACGGAAGATACCGCATTGGTATCACTCAAACAATCAAAACTGGCTTTTTAGATAAGCTAACGGGTGGCT
TTACTCAGGCTGCTAACGCAACAACGTTGATATTTAAAGCTTTAGGTAACCTCATTGCACAGCCAAGTCTTGATAAACTT
GGTGGGCCCGTTGCCATTTATGATTTAAGTGGGCAAGCAGCCCGAGAAGGCCTATTATCTGTTATCGCTTTACTTGCCAT
GCTCTCAATTAATCTGGGAATCGTAAATTTAATCCCAATCCCCGTCCTTGACGGAGGGAAAATTGTCCTCAATATTGTTG
AGGCCCTACGAGGCAAACCACTTTCACAAGAAAAAGAAGGAATTTTAACACTTGTTGGTCTTGTCTTTATGGTGGTCTTA
ATGATTGCTGTGACTTGGAATGATATCCTCCGAGCCTTTATTAGATAA

Domains


Predicted by InterproScan.

(7-400)

(204-256)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.086

100

0.566

  eeP Streptococcus thermophilus LMD-9

55.847

100

0.564