Detailed information NTG0091832

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: OCV39_RS02735
• Genome accession: NZ_AP025472
• Coordinates: 570773..574162 (-)
• Length: 1129 a.a.
• NCBI ID: WP_261888879.1
• Uniprot ID: -
• Organism: Vibrio cortegadensis strain CECT 7227
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 565773..579162

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCV39_RS02720	-	566245..567270 (-)	1026	WP_113799212.1	ABC transporter permease	-
OCV39_RS02725	-	567273..568259 (-)	987	WP_113799210.1	ABC transporter permease	-
OCV39_RS02730	-	568429..570111 (-)	1683	WP_113799208.1	ABC transporter substrate-binding protein	-
OCV39_RS02735	chiS	570773..574162 (-)	3390	WP_261888879.1	response regulator	Regulator
OCV39_RS02740	rsmC	574382..575404 (-)	1023	WP_171755931.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
OCV39_RS02745	-	575524..576609 (-)	1086	WP_261888880.1	AI-2E family transporter	-
OCV39_RS02750	hemL	576862..578157 (-)	1296	WP_261888881.1	glutamate-1-semialdehyde 2,1-aminomutase	-
OCV39_RS02755	erpA	578442..578783 (+)	342	WP_017054122.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127015.04 Da
• Isoelectric Point: 6.1098

>NTDB_id=91832 OCV39_RS02735 WP_261888879.1 570773..574162(-) (chiS) [Vibrio cortegadensis strain CECT 7227]
MFRFYRKQKFKRLQNTLMMAFLVLSITPLTVIAVFFLQSHSTDLQEQNTSHLLSVRDTKQQQVIDYLQAQESEVMGFVRS
ELAYASGGRFYGLVNAFQRLGMDIDQARAHAQQRYIKGSGNQIKTSILPESSSYVGSERYRLLHKRYHSAYLELLKRADF
DDILLVDLEGNVAYSTYKHDNYGTNLLTGHYKDSNLGITFKKLADEVQSKRKSNEDYTPVIMSDFLIENGKQVAWLGAPI
VQQGYLHSYAMLRLPSNGITKLITDINKTSSMQTLLVGSDHLPRTLAHSQDDINTSLKVVDKALSGITGVGSYINAKGES
TIAAYAPIALKSSTWALVVELPENEAYARIQQLEKLFVLVMLTAIILVFIASHYLSNFITSPLLKLTWAAEKVSAGDLDE
NVINTDRKDEIGRLAISFSRMQRSIREKIQLIESQNKELEQNLKLIQKQNDDLQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPAHQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIQKSAVDISSATRLVLELSNHLLGNKPIRI
INQITTNVAFVSADPQRLEQILYNLIGNAIKYTSEGKIVISANIVDDSVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAG
RYRQGAGLGLSITRQLIELMGGALYVSSQPMVGTTFSFTLPIANEEEIASSYNMTSLNHFKAPDAFDVIEGESTALPENS
DGPLLIVADDEPVNLHVLDSFLRLEGYRVRTANDGPETIELIKQEKPELLLLDVMMPGMSGYQVCEKLREEYDHAELPIL
MLTALNQTEDRIRGFQAGANDYLSKPFNKQELAARIIAHLTASKAELRRIENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDMRIRFANDAASKLFRRSQEQLKRSMADEIIAPKYLNVTQEHYCGDVDIYVEDIRQHISTDILKLAKG
SGLHAMYIFNIGGGVNAARINNLETAVEALSSYAFEGDKNKLQQLKELGGEFTRLADKAVGEGMNKQDLMREILVDAMTN
ALDYWERVTDQSKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSIEFILEHCKEQSPERAHIEVLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=91832 OCV39_RS02735 WP_261888879.1 570773..574162(-) (chiS) [Vibrio cortegadensis strain CECT 7227]
ATGTTTAGGTTCTATCGAAAGCAAAAATTCAAGCGCCTTCAGAATACTTTAATGATGGCTTTTCTTGTTTTAAGTATCAC
ACCTTTAACTGTGATTGCGGTCTTTTTTCTCCAATCTCACAGCACCGATCTTCAAGAGCAAAACACCTCACACCTCTTAT
CGGTTCGAGATACAAAACAACAGCAAGTCATTGATTATCTACAAGCTCAAGAATCAGAAGTGATGGGCTTTGTTCGTTCA
GAACTCGCCTATGCCAGTGGTGGGCGTTTTTATGGCTTAGTGAACGCTTTTCAACGCTTAGGGATGGATATCGATCAAGC
GAGAGCCCATGCTCAGCAACGATATATCAAAGGTTCAGGCAACCAAATAAAAACGTCAATCCTTCCAGAATCCAGCAGCT
ATGTTGGAAGCGAACGTTATCGCCTACTTCATAAACGCTATCACTCTGCTTATCTAGAATTGCTTAAACGTGCGGATTTT
GATGACATTCTATTAGTAGATCTTGAAGGTAATGTCGCCTATTCCACCTATAAACATGATAACTACGGCACCAATTTACT
GACAGGTCACTATAAAGACTCAAACCTTGGTATTACCTTTAAAAAACTGGCTGATGAAGTGCAATCTAAACGCAAGAGCA
ATGAAGATTACACCCCTGTGATTATGTCGGACTTTTTAATTGAGAACGGAAAACAGGTAGCGTGGTTAGGTGCGCCAATT
GTTCAGCAAGGGTACCTACACAGCTACGCAATGTTGCGCCTACCAAGCAATGGCATTACAAAGTTAATCACGGATATTAA
TAAAACCTCCTCAATGCAAACCCTATTGGTTGGCAGTGATCACCTACCCAGAACCCTCGCGCATAGCCAAGACGACATCA
ACACCAGTTTAAAAGTTGTTGATAAGGCGTTAAGCGGAATCACGGGGGTCGGTAGCTATATCAATGCTAAGGGCGAAAGC
ACCATTGCCGCTTATGCTCCTATCGCACTGAAAAGTAGTACTTGGGCACTGGTGGTTGAACTGCCTGAAAATGAAGCTTA
CGCCCGAATTCAGCAGCTCGAAAAACTCTTCGTGCTTGTCATGCTGACCGCGATTATTTTAGTTTTTATCGCCTCTCACT
ATTTATCCAACTTCATCACTTCCCCACTTTTAAAGCTCACCTGGGCAGCAGAAAAAGTGTCCGCGGGAGATCTCGATGAG
AATGTCATCAATACCGACCGTAAAGATGAAATTGGACGTTTAGCGATCAGCTTCTCCCGTATGCAACGTTCCATTCGAGA
AAAAATTCAACTCATTGAAAGTCAAAACAAGGAACTTGAGCAAAACCTGAAGTTGATCCAAAAACAAAATGACGATCTAC
AACTGGCAAATAAACTCAAAGATGAATTCTTAGCAACCACTTCACATGAATTACGAACACCATTGCACGGAATGGTGGGC
ATTGCCGAAGCTCTCATTTCAGGTGCGAATGGACCGATCCCTGCCCATCAGAAATATCAGCTCGACATTATTATTAACAG
TGGTCAGCGACTTGCGACATTAGTCGACGACCTACTGGACTACCATAAAATGCGCTACGGCAGCTTGGACATTCAAAAAT
CTGCTGTCGATATTTCTAGTGCGACCCGTTTGGTGTTGGAACTGTCCAATCACTTACTCGGCAATAAACCCATTCGCATC
ATTAACCAAATCACCACCAACGTTGCTTTCGTTTCTGCGGACCCTCAGCGATTGGAACAAATCCTATATAATTTAATTGG
CAATGCCATCAAGTACACCTCTGAAGGCAAGATTGTTATCTCTGCCAACATTGTCGATGACTCAGTTCGAGTGCAAGTGG
TCGATACAGGCCAAGGCATTCCTGCAGAGCATTTAGAGCATATTTTTGAACCCTTAATTCAAGCAGGTCAAGATGCTGGA
CGCTATCGTCAAGGTGCCGGTTTAGGGCTATCCATCACTCGTCAACTCATTGAGTTAATGGGTGGGGCTCTGTATGTGAG
TAGCCAACCTATGGTAGGGACCACATTTAGTTTCACTCTGCCCATCGCGAATGAAGAAGAGATTGCCTCATCTTATAACA
TGACATCGCTCAACCACTTTAAGGCTCCCGATGCCTTTGATGTCATAGAGGGTGAAAGTACCGCACTGCCTGAAAATAGC
GATGGACCTCTGCTTATTGTCGCCGACGATGAGCCTGTTAACTTACATGTCCTCGATAGTTTCTTACGCCTTGAAGGCTA
TCGTGTTCGCACCGCTAATGATGGGCCAGAAACTATTGAACTGATTAAACAGGAGAAGCCTGAGTTATTACTATTAGATG
TCATGATGCCAGGAATGAGTGGCTACCAGGTGTGCGAAAAATTAAGAGAAGAGTACGATCATGCCGAGCTTCCTATTTTA
ATGTTAACCGCCCTAAACCAAACGGAGGACCGCATTCGAGGCTTCCAAGCTGGTGCTAATGATTATTTGTCTAAACCTTT
CAACAAACAGGAGCTTGCTGCTCGAATTATTGCCCATTTAACGGCCAGCAAAGCCGAGCTCCGCCGAATTGAAAATGATC
AATTACAGTTAGAGTTAAAACACCGCGCAATGGTCGAAGCGAACTTACTAGAAACTCAAGGCCGCTTGCTTGAACAACTA
GAATCAGCTCCAGAAGCTATTATCTGCATTCGAGATGACATGCGTATTCGCTTTGCCAATGACGCGGCATCGAAGCTATT
TAGACGCTCTCAAGAACAACTTAAACGCTCAATGGCCGATGAAATCATTGCTCCAAAATACCTTAATGTGACGCAAGAGC
ATTATTGTGGAGACGTCGATATCTACGTTGAAGACATTCGACAGCATATCTCTACTGATATTCTTAAATTAGCAAAAGGC
TCCGGTTTGCATGCCATGTATATATTTAACATTGGGGGCGGTGTTAATGCGGCACGTATCAATAACCTAGAGACAGCAGT
AGAAGCACTATCAAGTTACGCTTTTGAAGGCGATAAAAATAAACTTCAGCAACTTAAAGAGCTTGGCGGTGAATTTACTC
GCCTTGCGGATAAAGCTGTGGGTGAAGGAATGAACAAGCAAGATTTAATGCGTGAAATCTTAGTGGATGCAATGACCAAC
GCACTCGACTACTGGGAGAGAGTCACCGATCAGTCTAAATTTGCATTCGCCGAACAGAGTGGTCTATGGCGCGTCTATTT
AGACAGAAGCACTCTACAAACCCGCACCTTGGACAAATACCTACGAGTCGAAACCCTGCCGAAAACGCCTCGCTGGCGAA
CGGTATTAAGCTCAATTGAGTTTATATTAGAACATTGCAAAGAGCAGAGCCCAGAACGAGCTCATATTGAAGTGCTACGC
GATAAACTACAGAAGCTGTTAACGAGTTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

• HAMP domain (HAMP) (375-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	78.034	100	0.78