Detailed information NTG0918256

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ABXJ52_RS12550
• Genome accession: NZ_CP160402
• Coordinates: 2716314..2717600 (-)
• Length: 428 a.a.
• NCBI ID: WP_367041882.1
• Uniprot ID: -
• Organism: Streptomyces sp. Je 1-332
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2711314..2722600

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXJ52_RS12535 (ABXJ52_12535)	-	2711465..2714089 (-)	2625	WP_367041876.1	valine--tRNA ligase	-
ABXJ52_RS12540 (ABXJ52_12540)	-	2714228..2715199 (+)	972	WP_367041878.1	hypothetical protein	-
ABXJ52_RS12545 (ABXJ52_12545)	-	2715316..2716227 (+)	912	WP_367041880.1	hypothetical protein	-
ABXJ52_RS12550 (ABXJ52_12550)	clpX	2716314..2717600 (-)	1287	WP_367041882.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
ABXJ52_RS12555 (ABXJ52_12555)	clpP	2717756..2718436 (-)	681	WP_367041884.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ABXJ52_RS12560 (ABXJ52_12560)	clpP	2718498..2719103 (-)	606	WP_367049010.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ABXJ52_RS12565 (ABXJ52_12565)	tig	2719513..2720886 (-)	1374	WP_367041886.1	trigger factor	-
ABXJ52_RS12580 (ABXJ52_12580)	-	2721419..2721613 (-)	195	WP_160505028.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46780.51 Da
• Isoelectric Point: 4.7790

>NTDB_id=918256 ABXJ52_RS12550 WP_367041882.1 2716314..2717600(-) (clpX) [Streptomyces sp. Je 1-332]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVHWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGETGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIHSKRELQEKDRFEDIMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVHSNVNPTLVPRDARGPGAGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=918256 ABXJ52_RS12550 WP_367041882.1 2716314..2717600(-) (clpX) [Streptomyces sp. Je 1-332]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGGAAGAGTCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGTCCCGGTGTGTACATCTGCGATGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAGGTGCACTGGGAGGAACTCCCCAAGCCTCGCGAGATCTACGAATTCCTCGAGGGGTACGTCGTGGGCCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTGGCGGTCTACAACCACTACAAGCGGGTCCAGGCCGGTGAGACCGGCGGGGCGCAGGGCCG
TGACGACGCGATCGAACTCGCCAAGTCCAACATCCTGCTGCTCGGCCCGACCGGCTCCGGCAAGACGCTGCTCGCGCAGA
CGCTCGCGCGCATGCTGAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTCACGGAGGCCGGTTATGTCGGCGAGGAC
GTCGAGAACATCCTCCTGAAGCTCATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCTCGCAAGAGCGAGAACCCCTCGATCACGCGCGATGTCTCGGGTGAAGGCGTCCAGCAGGCCC
TGCTCAAGATCCTGGAGGGCACCACGGCCTCCGTCCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCGTTCGCCGGCCTCGAGAAGATCATCGAGTCGCGGGCGGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCACTCCAAGCGCGAGCTTCAGGAGAAGGACCGGTTCGAGGACATCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTTCCCGTGATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTTGTGGAGCCGCGCAACGCACTCGTGAAGCAGTACCAACGCCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGTGAGGCCCTCGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCGCGTGGTCTGC
GCGCCATCATGGAGGAAGTCCTCCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACG
GCGGACGTCGTCCACTCGAACGTGAACCCGACCCTGGTGCCGCGCGACGCGCGGGGCCCGGGCGCGGGCGAGCAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.925	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.988	96.028	0.528