Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   OCV19_RS10975 Genome accession   NZ_AP025463
Coordinates   2446334..2447722 (-) Length   462 a.a.
NCBI ID   WP_004734031.1    Uniprot ID   A0A0T7ERT3
Organism   Vibrio celticus strain CECT 7224     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 2441334..2452722
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OCV19_RS10940 moaE 2441886..2442341 (-) 456 WP_017062176.1 molybdopterin synthase catalytic subunit MoaE -
  OCV19_RS10945 moaD 2442344..2442589 (-) 246 WP_019823606.1 molybdopterin synthase sulfur carrier subunit -
  OCV19_RS10950 moaC 2442586..2443065 (-) 480 WP_004734026.1 cyclic pyranopterin monophosphate synthase MoaC -
  OCV19_RS10955 moaB 2443078..2443590 (-) 513 WP_010437177.1 molybdenum cofactor biosynthesis protein B -
  OCV19_RS10960 moaA 2443677..2444666 (-) 990 WP_026012219.1 GTP 3',8-cyclase MoaA -
  OCV19_RS10965 - 2445002..2445889 (+) 888 WP_065676441.1 YvcK family protein -
  OCV19_RS10970 luxU 2445965..2446309 (-) 345 WP_048611583.1 quorum-sensing phosphorelay protein LuxU -
  OCV19_RS10975 luxO 2446334..2447722 (-) 1389 WP_004734031.1 quorum-sensing sigma-54 dependent transcriptional regulator LuxO Regulator
  OCV19_RS10980 uvrB 2448025..2450055 (-) 2031 WP_065676440.1 excinuclease ABC subunit UvrB -
  OCV19_RS10990 melB 2450930..2452303 (-) 1374 WP_052878989.1 melibiose:sodium transporter MelB -

Sequence

Protein


Download         Length: 462 a.a.        Molecular weight: 51762.31 Da        Isoelectric Point: 6.4047

>NTDB_id=91705 OCV19_RS10975 WP_004734031.1 2446334..2447722(-) (luxO) [Vibrio celticus strain CECT 7224]
MQSKTLDNKSKYLLMVEDTASVAALYRSYLTPLEIDINIVGTGRDAIESLNHRIPDLILLDLRLPDMTGMDVLFAVKQKY
PEVPVIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRITVNNAIRKATKLKNSSEHPGNQNYQGFIGSSQTMQQVYRT
IDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADG
GTLFLDELCEMDLELQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRE
RGEDVIEIAYSLLGYMSVEEGKAFVRFAQEVLDRFNQYEWPGNVRQLQNVLRNVVVLNNGKEITLNMLPPPLNQPIENSL
RLKEKQNEDITVKDIFPLWITEKTAIEQAIKACDGNIPRAAGFLDVSPSTIYRKLQTWNAKQ

Nucleotide


Download         Length: 1389 bp        

>NTDB_id=91705 OCV19_RS10975 WP_004734031.1 2446334..2447722(-) (luxO) [Vibrio celticus strain CECT 7224]
ATGCAATCAAAAACGCTAGATAACAAATCGAAGTATTTGTTGATGGTCGAGGATACCGCTTCGGTAGCAGCTTTATATCG
CTCGTATCTTACACCGCTCGAAATTGATATCAACATTGTCGGCACTGGCCGCGATGCAATCGAGAGTTTGAATCATCGAA
TCCCAGACCTTATTTTATTAGATCTACGTCTACCTGATATGACGGGTATGGACGTGCTATTTGCTGTAAAACAGAAGTAC
CCTGAAGTTCCGGTTATCTTCATGACGGCTCATGGCTCTATCGATACCGCCGTAGAAGCGATGCGTCATGGTTCTCAAGA
TTTCCTTATCAAACCGTGTGAAGCCGACCGACTCCGTATTACGGTGAACAACGCGATCCGCAAAGCCACCAAGCTTAAAA
ATAGCTCGGAACACCCGGGAAACCAAAATTACCAAGGCTTTATCGGCAGTAGCCAAACCATGCAGCAGGTTTACCGAACG
ATTGATTCTGCTGCATCGAGTAAGGCGAGCATTTTCATTACTGGTGAAAGTGGTACCGGTAAAGAGGTATGTGCAGAAGC
CATTCATGCGGCGAGTAAGCGTGGCGATAAGCCTTTCATCGCGATTAACTGTGCCGCTATCCCTAAAGATCTGATTGAAA
GTGAATTGTTTGGTCACGTTAAAGGTGCCTTTACCGGTGCGGCGACCGATCGCCAAGGTGCTGCTGAGCTTGCTGATGGT
GGAACACTGTTTCTTGATGAACTGTGCGAAATGGACTTAGAGCTGCAAACTAAGCTGCTGCGCTTTATCCAAACCGGTAC
TTTCCAAAAAGTCGGCTCTTCGAAGATGAAGAGTGTCGACGTTCGTTTTGTGTGTGCGACCAACCGTGACCCTTGGAAAG
AAGTACAAGAAGGTCGCTTTAGAGAAGATTTATACTATCGTTTATACGTGATTCCATTGCACTTGCCGCCATTGCGTGAG
CGTGGTGAAGATGTCATCGAGATCGCGTATTCTCTGCTAGGCTATATGTCGGTCGAGGAGGGGAAGGCGTTTGTACGTTT
TGCTCAGGAAGTACTTGATCGCTTTAATCAATATGAGTGGCCGGGTAACGTTCGTCAGCTACAAAACGTGTTACGAAACG
TGGTGGTATTAAATAACGGTAAAGAGATTACTCTCAACATGCTTCCACCACCGTTGAACCAACCGATTGAAAACAGTCTG
CGATTGAAAGAGAAGCAGAATGAAGACATCACGGTAAAAGATATTTTCCCATTGTGGATCACTGAGAAAACGGCTATCGA
ACAAGCCATTAAAGCGTGTGATGGCAACATCCCCCGTGCGGCAGGTTTCTTAGATGTCAGTCCATCGACGATATACCGTA
AGTTGCAAACGTGGAATGCGAAGCAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(14-122)

Bacterial regulatory protein, Fis family (HTH_8)

(418-456)

Sigma-54 interaction domain (Sigma54_activat)

(148-313)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0T7ERT3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

86.384

96.97

0.838
  pilR Pseudomonas aeruginosa PAK

38.085

97.186

0.37

Multiple sequence alignment