Detailed information NTG0917018

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: AB0U09_RS23350
• Genome accession: NZ_CP160108
• Coordinates: 4838526..4839935 (-)
• Length: 469 a.a.
• NCBI ID: WP_001315107.1
• Uniprot ID: A0A0H2Z4V2
• Organism: Escherichia coli strain 729_141114_1_15
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 4833526..4844935

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0U09_RS23325	yihA	4834786..4835418 (-)	633	WP_000183349.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
AB0U09_RS23330	-	4835715..4835881 (+)	167	Protein_4555	hypothetical protein	-
AB0U09_RS23335	yihI	4836000..4836509 (+)	510	WP_001295266.1	Der GTPase-activating protein YihI	-
AB0U09_RS23340	hemN	4836698..4838071 (+)	1374	WP_000116096.1	oxygen-independent coproporphyrinogen III oxidase	-
AB0U09_RS23345	yshB	4838304..4838414 (-)	111	WP_000893994.1	YshB family small membrane protein	-
AB0U09_RS23350	luxO	4838526..4839935 (-)	1410	WP_001315107.1	nitrogen regulation protein NR(I)	Regulator
AB0U09_RS23355	glnL	4839947..4840996 (-)	1050	WP_000190574.1	nitrogen regulation protein NR(II)	-
AB0U09_RS23360	glnA	4841170..4842579 (-)	1410	WP_001271717.1	glutamate--ammonia ligase	-
AB0U09_RS23365	typA	4842952..4844775 (+)	1824	WP_000570668.1	ribosome-dependent GTPase TypA	-

Sequence

Protein

• Length: 469 a.a.
• Molecular weight: 52302.79 Da
• Isoelectric Point: 6.5091

>NTDB_id=917018 AB0U09_RS23350 WP_001315107.1 4838526..4839935(-) (luxO) [Escherichia coli strain 729_141114_1_15]
MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVII
MTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQPRNVQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDE
IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPR
LARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESNVPESTSHMQPD
SWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME

Nucleotide

• Length: 1410 bp

>NTDB_id=917018 AB0U09_RS23350 WP_001315107.1 4838526..4839935(-) (luxO) [Escherichia coli strain 729_141114_1_15]
ATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGTTGGGTGCTTGAACGTGCGCTCGCTGGAGCGGG
TTTAACCTGTACGACATTTGAGAACGGCGCGGAAGTACTGGAGGCGCTGGCGAGCAAAACGCCGGATGTGCTGCTTTCAG
ATATCCGTATGCCGGGAATGGACGGGCTGGCGCTGCTCAAGCAGATTAAACAGCGCCATCCGATGCTTCCGGTCATCATT
ATGACCGCACATTCCGATCTGGATGCTGCCGTCAGCGCCTATCAACAAGGGGCATTTGATTATCTGCCCAAACCGTTTGA
TATCGACGAAGCCGTGGCGCTGGTTGAGCGCGCCATCAGTCATTACCAGGAACAGCAGCAGCCGCGTAATGTTCAGCTTA
ACGGCCCAACGACCGATATCATCGGTGAAGCGCCAGCCATGCAGGACGTGTTCCGGATTATCGGTCGGCTTTCGCGTTCT
TCTATTAGCGTGCTGATTAACGGCGAATCCGGCACCGGTAAAGAACTGGTCGCTCATGCCCTGCATCGCCACAGTCCGCG
AGCCAAAGCGCCGTTTATCGCGCTCAATATGGCGGCTATCCCGAAGGATTTGATCGAATCCGAACTGTTTGGTCACGAGA
AAGGCGCATTTACCGGCGCGAATACCATTCGTCAGGGGCGTTTTGAACAGGCTGATGGCGGCACGTTATTTCTCGATGAA
ATTGGCGATATGCCGCTAGATGTGCAGACGCGTTTGCTGCGCGTGCTGGCAGACGGTCAGTTTTATCGCGTTGGCGGCTA
TGCGCCGGTGAAAGTAGATGTGCGGATTATCGCTGCCACTCACCAGAATCTTGAACAGCGGGTGCAGGAAGGCAAGTTCC
GTGAGGATCTGTTCCACCGCCTGAACGTCATCCGCGTTCATCTGCCGCCGCTGCGCGAACGTCGGGAAGATATTCCCCGT
CTGGCGCGCCATTTTTTACAGGTTGCCGCGCGAGAGCTGGGCGTAGAAGCGAAGTTGCTGCATCCGGAAACCGAAGCCGC
GCTGACGCGTCTGGCGTGGCCAGGCAACGTGCGCCAGCTGGAAAACACCTGTCGCTGGCTAACGGTGATGGCTGCCGGGC
AGGAAGTGTTGATTCAGGATTTGCCTGGCGAACTGTTTGAATCAAACGTACCGGAAAGCACTTCACACATGCAGCCGGAC
AGTTGGGCAACGCTGTTAGCACAGTGGGCAGACAGAGCGCTGCGTTCCGGTCATCAAAACCTGCTTTCCGAAGCACAGCC
AGAGCTGGAACGGACGTTACTGACCACCGCGCTGCGACATACGCAGGGGCATAAACAGGAAGCGGCGCGGCTACTTGGCT
GGGGTCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGATGGAGTGA

Domains

Predicted by InterProScan.

• Bacterial regulatory protein, Fis family (HTH_8) (427-466)

• Response regulator receiver domain (Response_reg) (6-115)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

3D structure

• AlphaFold DB: A0A0H2Z4V2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	39.655	98.934	0.392
pilR	Pseudomonas aeruginosa PAK	38.854	100	0.39