Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   T1M39_RS04715 Genome accession   NZ_CP141327
Coordinates   988620..989861 (-) Length   413 a.a.
NCBI ID   WP_003565798.1    Uniprot ID   A0A0C9PVU8
Organism   Lacticaseibacillus paracasei strain S135-24W     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 983620..994861
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  T1M39_RS04710 (T1M39_04710) - 986868..988595 (-) 1728 WP_003575285.1 proline--tRNA ligase -
  T1M39_RS04715 (T1M39_04715) eeP 988620..989861 (-) 1242 WP_003565798.1 RIP metalloprotease RseP Regulator
  T1M39_RS04720 (T1M39_04720) - 989878..990666 (-) 789 WP_003565800.1 phosphatidate cytidylyltransferase -
  T1M39_RS04725 (T1M39_04725) - 990702..991454 (-) 753 WP_003575287.1 isoprenyl transferase -
  T1M39_RS04730 (T1M39_04730) frr 991984..992541 (-) 558 WP_003565804.1 ribosome recycling factor -
  T1M39_RS04735 (T1M39_04735) pyrH 992541..993260 (-) 720 WP_003565806.1 UMP kinase -
  T1M39_RS04740 (T1M39_04740) tsf 993497..994378 (-) 882 WP_003565808.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45107.72 Da        Isoelectric Point: 8.6663

>NTDB_id=917015 T1M39_RS04715 WP_003565798.1 988620..989861(-) (eeP) [Lacticaseibacillus paracasei strain S135-24W]
MTTIIAFIVIFCILVVVHEFGHFYFAKRSGILVREFSIGMGPKLWASHKNNTTYTLRLLPLGGYVRMAGWQDEEDEIKPG
TMLSLILNDQGKVVRINASDKTTLAGGMPVQVSRVDLVKDLVIEGYPNGDETALQTWQVDHDATIIEEDGTEVQIAPEDV
QFQNAPVWRRLLVNFAGPMNNFLLAILAFIIYGLFFGVQVLNTNQIGTVVPGYPAAEAGLKSNATVQTIDGQKMSSFTDL
SKIVSKNAGKSVTFTVKENGKSKNIVIKPNKEGKIGVEAHVDKSPANAIPFGFSQTWNLAVRTWDVLKSMVTGGFSLNKL
AGPVGIYTMTSQSAKGGIQGLLFFMGYLSLGLGITNLLPIPVLDGGKILLNLIEIIRRKPLKPETEGVVTMIGLGLMVLL
MLAVTINDIMRYF

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=917015 T1M39_RS04715 WP_003565798.1 988620..989861(-) (eeP) [Lacticaseibacillus paracasei strain S135-24W]
ATGACCACTATCATCGCCTTTATCGTTATCTTCTGCATTCTTGTGGTAGTTCACGAGTTTGGCCATTTTTACTTTGCAAA
ACGCAGCGGCATTCTAGTCCGGGAATTTTCGATCGGTATGGGCCCGAAGCTGTGGGCGTCGCACAAGAACAATACGACCT
ACACGCTGCGGTTGCTACCACTTGGCGGATACGTCCGCATGGCTGGCTGGCAAGATGAGGAGGACGAGATTAAACCCGGG
ACGATGCTGAGCCTGATTCTTAACGATCAAGGCAAGGTTGTCCGGATCAATGCCAGTGACAAAACGACTTTGGCCGGCGG
AATGCCGGTTCAAGTGAGTCGCGTCGATTTAGTTAAGGATCTGGTGATTGAAGGTTATCCAAACGGGGATGAAACAGCCT
TGCAAACTTGGCAGGTTGACCACGATGCGACGATCATTGAAGAAGACGGAACCGAGGTTCAGATCGCGCCAGAAGACGTT
CAGTTTCAAAACGCCCCGGTTTGGCGCCGGTTATTGGTCAACTTCGCCGGTCCGATGAATAACTTCTTACTCGCGATTCT
AGCTTTTATTATTTACGGGCTGTTTTTTGGTGTTCAGGTGCTCAATACCAACCAAATCGGAACAGTTGTGCCAGGTTATC
CAGCTGCAGAAGCTGGTCTTAAGTCCAATGCGACGGTGCAAACGATTGACGGTCAAAAAATGTCATCATTCACGGATCTT
TCAAAGATCGTCAGTAAAAATGCCGGTAAATCAGTGACATTTACCGTGAAGGAAAACGGTAAAAGCAAGAACATCGTGAT
CAAGCCGAATAAAGAAGGCAAGATCGGGGTTGAAGCACACGTCGATAAGTCCCCAGCAAATGCCATTCCTTTTGGCTTTT
CTCAAACTTGGAATTTGGCTGTCCGCACTTGGGACGTGCTCAAATCCATGGTGACCGGCGGTTTTTCACTCAATAAACTG
GCTGGCCCAGTTGGTATTTATACCATGACGAGTCAAAGTGCCAAAGGCGGTATTCAAGGATTACTCTTCTTTATGGGTTA
CTTGAGTCTCGGCTTAGGGATTACCAATTTGTTGCCGATTCCAGTGCTTGATGGTGGTAAAATTCTTTTGAACCTGATCG
AAATTATTCGCCGTAAGCCATTAAAACCGGAAACGGAAGGCGTTGTGACCATGATTGGCTTGGGCCTGATGGTTCTATTA
ATGCTAGCGGTCACAATCAACGATATCATGCGCTACTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(206-257)

Peptidase family M50 (Peptidase_M50)

(6-400)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C9PVU8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.292

100

0.506
  eeP Streptococcus thermophilus LMD-9

49.057

100

0.504