Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   U7118_RS16305 Genome accession   NZ_CP141283
Coordinates   2992939..2993130 (-) Length   63 a.a.
NCBI ID   WP_046380930.1    Uniprot ID   A0AA96V089
Organism   Bacillus subtilis strain DKU_09     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2987939..2998130
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U7118_RS16280 (U7118_16280) appD 2988265..2989251 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  U7118_RS16285 (U7118_16285) yjaZ 2989442..2990227 (-) 786 WP_324271334.1 DUF2268 domain-containing protein -
  U7118_RS16290 (U7118_16290) fabF 2990303..2991544 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  U7118_RS16295 (U7118_16295) fabH 2991567..2992505 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  U7118_RS16300 (U7118_16300) yjzB 2992670..2992909 (+) 240 WP_003232972.1 spore coat protein YjzB -
  U7118_RS16305 (U7118_16305) comZ 2992939..2993130 (-) 192 WP_046380930.1 ComG operon transcriptional repressor ComZ Regulator
  U7118_RS16310 (U7118_16310) med 2993145..2994098 (-) 954 WP_069837427.1 transcriptional regulator Med Regulator
  U7118_RS16315 (U7118_16315) - 2994189..2994746 (-) 558 WP_014479435.1 hypothetical protein -
  U7118_RS16320 (U7118_16320) - 2994828..2995562 (-) 735 WP_014479433.1 hypothetical protein -
  U7118_RS16325 (U7118_16325) yjzD 2995811..2995996 (+) 186 WP_003245236.1 YjzD family protein -
  U7118_RS16330 (U7118_16330) yjzC 2996043..2996222 (-) 180 WP_003245356.1 YjzC family protein -
  U7118_RS16335 (U7118_16335) - 2996400..2997550 (+) 1151 WP_087614160.1 IS3 family transposase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7282.31 Da        Isoelectric Point: 4.2564

>NTDB_id=916843 U7118_RS16305 WP_046380930.1 2992939..2993130(-) (comZ) [Bacillus subtilis strain DKU_09]
MQHEKSLEFLQIAMKYFPEAKEQFEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=916843 U7118_RS16305 WP_046380930.1 2992939..2993130(-) (comZ) [Bacillus subtilis strain DKU_09]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATTTCCCTGAAGCGAAAGAACAGTTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

96.825

100

0.968