Detailed information NTG0916844

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: U7118_RS16310
• Genome accession: NZ_CP141283
• Coordinates: 2993145..2994098 (-)
• Length: 317 a.a.
• NCBI ID: WP_069837427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain DKU_09
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 2988145..2999098

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U7118_RS16280 (U7118_16280)	appD	2988265..2989251 (-)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-
U7118_RS16285 (U7118_16285)	yjaZ	2989442..2990227 (-)	786	WP_324271334.1	DUF2268 domain-containing protein	-
U7118_RS16290 (U7118_16290)	fabF	2990303..2991544 (-)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
U7118_RS16295 (U7118_16295)	fabH	2991567..2992505 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
U7118_RS16300 (U7118_16300)	yjzB	2992670..2992909 (+)	240	WP_003232972.1	spore coat protein YjzB	-
U7118_RS16305 (U7118_16305)	comZ	2992939..2993130 (-)	192	WP_046380930.1	ComG operon transcriptional repressor ComZ	Regulator
U7118_RS16310 (U7118_16310)	med	2993145..2994098 (-)	954	WP_069837427.1	transcriptional regulator Med	Regulator
U7118_RS16315 (U7118_16315)	-	2994189..2994746 (-)	558	WP_014479435.1	hypothetical protein	-
U7118_RS16320 (U7118_16320)	-	2994828..2995562 (-)	735	WP_014479433.1	hypothetical protein	-
U7118_RS16325 (U7118_16325)	yjzD	2995811..2995996 (+)	186	WP_003245236.1	YjzD family protein	-
U7118_RS16330 (U7118_16330)	yjzC	2996043..2996222 (-)	180	WP_003245356.1	YjzC family protein	-
U7118_RS16335 (U7118_16335)	-	2996400..2997550 (+)	1151	WP_087614160.1	IS3 family transposase	-
U7118_RS16340 (U7118_16340)	argF	2997598..2998557 (-)	960	WP_014479432.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=916844 U7118_RS16310 WP_069837427.1 2993145..2994098(-) (med) [Bacillus subtilis strain DKU_09]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=916844 U7118_RS16310 WP_069837427.1 2993145..2994098(-) (med) [Bacillus subtilis strain DKU_09]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGTTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997