Detailed information NTG0916790

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: U7118_RS01985
• Genome accession: NZ_CP141283
• Coordinates: 381840..382985 (-)
• Length: 381 a.a.
• NCBI ID: WP_069837832.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain DKU_09
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 376840..387985

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U7118_RS01960 (U7118_01960)	pbpG	377107..379182 (-)	2076	WP_103330045.1	transglycosylase domain-containing protein	-
U7118_RS01965 (U7118_01965)	speE	379384..380214 (+)	831	WP_003227543.1	spermidine synthase	-
U7118_RS01970 (U7118_01970)	speB	380275..381147 (+)	873	WP_003227545.1	agmatinase	-
U7118_RS01975 (U7118_01975)	-	381212..381639 (-)	428	Protein_392	YbaK/EbsC family protein	-
U7118_RS01980 (U7118_01980)	phrF	381737..381856 (-)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
U7118_RS01985 (U7118_01985)	rapF	381840..382985 (-)	1146	WP_069837832.1	response regulator aspartate phosphatase RapF	Regulator
U7118_RS01990 (U7118_01990)	-	382988..383218 (+)	231	Protein_395	hypothetical protein	-
U7118_RS01995 (U7118_01995)	ywhK	383215..384566 (+)	1352	Protein_396	YncE family protein	-
U7118_RS02000 (U7118_02000)	ywhL	384605..385981 (+)	1377	WP_324271429.1	YncE family protein	-
U7118_RS02005 (U7118_02005)	albG	385987..386688 (-)	702	WP_046160959.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
U7118_RS02010 (U7118_02010)	albF	386685..387965 (-)	1281	WP_017696258.1	M16 family metallopeptidase	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45624.07 Da
• Isoelectric Point: 5.0624

>NTDB_id=916790 U7118_RS01985 WP_069837832.1 381840..382985(-) (rapF) [Bacillus subtilis strain DKU_09]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFTIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=916790 U7118_RS01985 WP_069837832.1 381840..382985(-) (rapF) [Bacillus subtilis strain DKU_09]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACAGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCACTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.688	100	0.987
rapC	Bacillus subtilis subsp. subtilis str. 168	57.105	99.738	0.57