Detailed information NTG0916482

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABVG00_RS21730
• Genome accession: NZ_CP160025
• Coordinates: 4512043..4513068 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 1000
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4507043..4518068

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABVG00_RS21710 (ABVG00_21710)	metJ	4508104..4508421 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ABVG00_RS21715 (ABVG00_21715)	yiiX	4508605..4509213 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ABVG00_RS21720 (ABVG00_21720)	rpmE	4509274..4509486 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABVG00_RS21725 (ABVG00_21725)	priA	4509689..4511887 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
ABVG00_RS21730 (ABVG00_21730)	cytR	4512043..4513068 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABVG00_RS21735 (ABVG00_21735)	ftsN	4513160..4514119 (+)	960	WP_000068828.1	cell division protein FtsN	-
ABVG00_RS21740 (ABVG00_21740)	hslV	4514212..4514742 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABVG00_RS21745 (ABVG00_21745)	hslU	4514752..4516083 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ABVG00_RS21750 (ABVG00_21750)	menA	4516150..4517076 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABVG00_RS21755 (ABVG00_21755)	rraA	4517169..4517654 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABVG00_RS21760 (ABVG00_21760)	zapB	4517739..4517984 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=916482 ABVG00_RS21730 WP_000644904.1 4512043..4513068(+) (cytR) [Escherichia coli strain 1000]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=916482 ABVG00_RS21730 WP_000644904.1 4512043..4513068(+) (cytR) [Escherichia coli strain 1000]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628