Detailed information NTG0916406

Bioinformatically predicted

Overview

• Name: pilJ
• Type: Machinery gene
• Locus tag: VKI22_RS08530
• Genome accession: NZ_CP141254
• Coordinates: 2001768..2004527 (+)
• Length: 919 a.a.
• NCBI ID: WP_155084339.1
• Uniprot ID: -
• Organism: Cyanobacterium aponinum UTEX 3221
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1996768..2009527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VKI22_RS08505 (VKI22_08505)	ruvX	1996826..1997257 (+)	432	WP_324283055.1	Holliday junction resolvase RuvX	-
VKI22_RS08510 (VKI22_08510)	murA	1997996..1999270 (+)	1275	WP_324283138.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
VKI22_RS08515 (VKI22_08515)	hpnH	1999354..2000367 (+)	1014	WP_155084337.1	adenosyl-hopene transferase HpnH	-
VKI22_RS08520 (VKI22_08520)	pilH	2000554..2000919 (+)	366	WP_015220734.1	response regulator transcription factor	Machinery gene
VKI22_RS08525 (VKI22_08525)	-	2001166..2001702 (+)	537	WP_015220733.1	chemotaxis protein CheW	-
VKI22_RS08530 (VKI22_08530)	pilJ	2001768..2004527 (+)	2760	WP_155084339.1	methyl-accepting chemotaxis protein	Machinery gene
VKI22_RS08535 (VKI22_08535)	-	2004635..2005399 (+)	765	WP_099435893.1	MlaE family lipid ABC transporter permease subunit	-
VKI22_RS08540 (VKI22_08540)	-	2005454..2006221 (+)	768	WP_324283056.1	ion channel	-
VKI22_RS08545 (VKI22_08545)	-	2006319..2007296 (-)	978	WP_324282640.1	transposase family protein	-
VKI22_RS08550 (VKI22_08550)	-	2007971..2008723 (-)	753	WP_324283057.1	hypothetical protein	-
VKI22_RS08555 (VKI22_08555)	-	2008727..2009248 (-)	522	WP_015220728.1	cofactor assembly of complex C subunit B	-

Sequence

Protein

• Length: 919 a.a.
• Molecular weight: 101624.88 Da
• Isoelectric Point: 3.8176

>NTDB_id=916406 VKI22_RS08530 WP_155084339.1 2001768..2004527(+) (pilJ) [Cyanobacterium aponinum UTEX 3221]
MVSETDYQERFKQARTAYLEGDLAEASFITDGIMDDYPDDPSAFLLKGHIHLRQQEYDLAQVNYQKVLDLTDHQDLVTLA
KQGLAEIEEDSEDQSLYPPEVEEPDFDDEVEEIGDDDDDNWTSSIQFDSIDWDIDDLEEEEIEDPTLQQNSPFDQSFSKN
SNNPPPTLSKSEKRTEQKKSGDDDEQDEDDTAANFIDPSLDENNFDDDINLDSASNDLLSFDFDNADIDYEQFESDSNDE
DLNQDEMQDTGAPTFVVSSEDEPELSDLEQMLTGETGFLNDLDDDLGDYSSQLEPLTAGKTSTNTGLNLEDDNMPLVPEG
EEDLFFAPDELDDIPDIDADELPVSSIFTKDNKPEQIFPNVIETDENVFDSDFDNEITGSFSFDTDKINLDLEEDISVSS
SLGDISGISSSIAINPEVEVPQGKLAKYYNFSLFTKQLVHGGVTGVVTFVIVLMVSLFQGGVKNIENTSVTTTESGGETT
EQTQETRETQEIPLPFSRTLLLSLIAGISGGASTIAMGYLMTNHIKRYTNDLQNHFESIYQGDYEIKATVYSQDEFGTLA
AGFNQMTKMIYTTTTEARKRAEETERAREDLQRQVIRLLDDVEGASRGDLTVQAEVTADVLGAVADAFNVTITNLRKIVK
QVQQAAVQVNKASTDSEVFARNQSSDALRMAEELAVTLNSVQMMTDSIQRVAENAREAEEVARSSSVTALKGGDAVERTV
AGILQIRETVSETTRKVKRLAEASQQISTIVAVISQISSRTNLLALNASIQAARAGEAGRGFAIVADEVRQLADRSAKSL
QEIEQIVLQIQTETGSVMTAMEEGIQQVRDVTERSEQAKRALEDIIQVSNRIDALVRSITADTDEQRENSRGVAKVMQAV
ELTAQATSQESQRVAGSLQNLVGIAKDLISSVERFRVDD

Nucleotide

• Length: 2760 bp

>NTDB_id=916406 VKI22_RS08530 WP_155084339.1 2001768..2004527(+) (pilJ) [Cyanobacterium aponinum UTEX 3221]
ATGGTATCAGAAACCGATTATCAAGAAAGATTTAAACAAGCTCGTACCGCTTATTTAGAAGGAGATTTAGCAGAAGCGTC
CTTCATCACTGATGGTATTATGGATGACTATCCAGATGATCCTAGTGCATTCTTACTAAAAGGTCATATTCATCTACGAC
AACAAGAATATGATTTAGCTCAAGTTAATTATCAAAAAGTCTTGGATTTAACAGATCATCAAGATTTAGTGACATTGGCT
AAACAAGGACTGGCAGAAATAGAAGAAGATAGCGAAGATCAATCTCTGTATCCTCCAGAGGTAGAAGAGCCAGATTTTGA
CGATGAAGTGGAAGAAATCGGTGACGATGATGATGATAATTGGACAAGCAGTATCCAATTTGACAGTATTGATTGGGATA
TAGATGATTTAGAAGAAGAAGAAATAGAAGATCCCACCCTACAGCAAAATTCTCCCTTTGATCAAAGTTTCTCTAAAAAT
TCCAATAATCCTCCCCCCACATTGAGTAAAAGTGAAAAACGCACAGAGCAAAAAAAATCAGGGGATGATGATGAACAGGA
TGAAGATGACACTGCCGCCAATTTTATTGACCCCTCTTTGGACGAAAACAATTTTGACGATGATATAAATTTAGATAGTG
CATCTAATGATTTGTTGAGCTTTGATTTTGATAATGCTGATATAGATTATGAACAGTTTGAAAGTGATTCTAATGATGAA
GATCTAAATCAAGATGAAATGCAAGATACAGGAGCTCCCACTTTTGTTGTGTCTAGTGAAGATGAACCTGAATTGAGTGA
TTTAGAACAAATGTTGACGGGGGAGACTGGTTTCCTTAATGATTTAGATGATGACTTAGGAGATTACAGTTCTCAGTTAG
AACCTTTAACTGCTGGTAAAACTTCAACTAATACGGGATTAAATTTAGAGGATGATAATATGCCTCTCGTACCCGAAGGA
GAAGAAGATTTATTTTTTGCTCCTGATGAGTTAGATGATATTCCCGACATTGATGCTGATGAGTTGCCAGTTTCAAGCAT
TTTTACAAAGGATAATAAACCAGAGCAAATATTTCCCAATGTTATAGAAACAGATGAGAATGTTTTTGATAGTGATTTTG
ATAATGAAATTACAGGTAGTTTTTCCTTTGATACAGATAAAATTAATTTAGATTTGGAAGAAGATATAAGTGTTTCTTCT
TCTTTAGGAGATATTTCTGGCATATCCTCGTCTATTGCTATTAATCCAGAAGTAGAAGTTCCCCAAGGAAAACTTGCCAA
ATATTATAATTTTTCCCTATTCACTAAACAATTAGTACATGGTGGTGTTACAGGAGTTGTTACTTTTGTGATTGTGCTAA
TGGTAAGTTTGTTTCAAGGGGGAGTTAAGAATATAGAAAATACAAGTGTGACGACTACTGAATCTGGAGGAGAAACGACC
GAACAAACTCAAGAAACAAGGGAAACTCAAGAAATACCATTGCCTTTTTCTCGGACATTGTTGTTAAGTTTAATCGCTGG
TATTAGTGGTGGAGCTTCTACCATTGCAATGGGTTATTTAATGACTAATCACATTAAACGCTATACCAATGACTTGCAAA
ATCACTTTGAATCCATTTATCAGGGTGATTATGAGATAAAAGCAACGGTTTATTCTCAAGATGAATTTGGTACTTTAGCT
GCTGGTTTTAATCAGATGACAAAAATGATTTATACCACTACCACAGAGGCGAGAAAGAGGGCTGAAGAGACGGAGAGAGC
AAGGGAGGATTTACAAAGACAGGTTATTCGTCTTCTTGATGATGTGGAAGGAGCTTCTAGGGGTGATTTAACGGTACAAG
CTGAGGTAACAGCAGACGTATTAGGGGCGGTAGCGGATGCTTTCAACGTGACTATTACTAACTTGCGGAAAATCGTTAAA
CAGGTACAACAGGCGGCGGTACAGGTTAACAAAGCAAGTACTGATAGTGAGGTGTTTGCTCGTAATCAATCGAGTGATGC
GTTGCGGATGGCGGAAGAATTGGCCGTTACGTTAAATTCTGTTCAGATGATGACAGATTCAATTCAGAGGGTGGCAGAAA
ACGCCAGAGAAGCGGAAGAGGTGGCCCGTTCCTCTAGTGTTACGGCTTTAAAGGGTGGTGATGCGGTAGAAAGAACTGTT
GCTGGTATTTTGCAGATTAGGGAAACAGTGTCAGAAACAACCCGAAAGGTAAAAAGATTGGCAGAGGCATCCCAACAAAT
TTCAACGATTGTGGCTGTTATTTCTCAGATTTCTTCTCGTACCAACCTATTAGCTTTAAATGCTTCTATTCAGGCCGCAA
GGGCAGGAGAGGCGGGGAGAGGATTTGCGATCGTTGCTGATGAGGTACGACAGTTAGCAGATAGGTCAGCAAAATCCTTG
CAAGAAATTGAACAAATTGTATTACAAATTCAAACAGAAACTGGTTCGGTTATGACGGCGATGGAAGAGGGTATTCAACA
GGTAAGAGATGTAACCGAGAGGTCTGAACAGGCAAAACGGGCATTGGAAGATATTATTCAAGTGTCCAATCGTATTGATG
CCTTGGTGCGATCGATTACAGCAGATACTGATGAGCAGAGAGAAAATTCCCGAGGAGTAGCAAAAGTAATGCAGGCGGTT
GAATTGACAGCTCAGGCAACTTCTCAAGAATCTCAGAGAGTAGCTGGTTCTTTGCAAAATTTGGTGGGCATTGCCAAAGA
TTTAATTTCCTCTGTGGAACGTTTTAGGGTTGATGATTAG

Domains

Predicted by InterproScan.

• Methyl-accepting chemotaxis protein (MCP) signalling domain (MCPsignal) (700-881)

• HAMP domain (HAMP) (521-570)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilJ	Synechocystis sp. PCC 6803	47.458	100	0.487