Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   U2H13_RS02065 Genome accession   NZ_CP141181
Coordinates   406871..406990 (+) Length   39 a.a.
NCBI ID   WP_103527149.1    Uniprot ID   -
Organism   Bacillus sp. A1     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 401871..411990
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U2H13_RS02050 (U2H13_02050) - 403483..404166 (+) 684 WP_014416901.1 response regulator transcription factor -
  U2H13_RS02055 (U2H13_02055) - 404153..405580 (+) 1428 WP_103527150.1 HAMP domain-containing sensor histidine kinase -
  U2H13_RS02060 (U2H13_02060) rapC 405739..406887 (+) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  U2H13_RS02065 (U2H13_02065) phrC 406871..406990 (+) 120 WP_103527149.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  U2H13_RS02070 (U2H13_02070) - 407140..407250 (-) 111 WP_369878517.1 YjcZ family sporulation protein -
  U2H13_RS02075 (U2H13_02075) - 407330..408694 (-) 1365 WP_014416903.1 aspartate kinase -
  U2H13_RS02080 (U2H13_02080) ceuB 409108..410061 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  U2H13_RS02085 (U2H13_02085) - 410051..410998 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  U2H13_RS02090 (U2H13_02090) - 410992..411750 (+) 759 WP_022552588.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4243.97 Da        Isoelectric Point: 9.4191

>NTDB_id=916221 U2H13_RS02065 WP_103527149.1 406871..406990(+) (phrC) [Bacillus sp. A1]
MKLKSKWFVICLAAAAIFTVTGAGQTNQSEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=916221 U2H13_RS02065 WP_103527149.1 406871..406990(+) (phrC) [Bacillus sp. A1]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAAA
TCAGTCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

67.5

100

0.692