Detailed information NTG0916220

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: U2H13_RS02060
• Genome accession: NZ_CP141181
• Coordinates: 405739..406887 (+)
• Length: 382 a.a.
• NCBI ID: WP_014304340.1
• Uniprot ID: I2C1C2
• Organism: Bacillus sp. A1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 400739..411887

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U2H13_RS02040 (U2H13_02040)	-	401139..401822 (-)	684	WP_022552585.1	ABC transporter ATP-binding protein	-
U2H13_RS02045 (U2H13_02045)	-	401837..403270 (-)	1434	WP_121984533.1	ABC transporter permease	-
U2H13_RS02050 (U2H13_02050)	-	403483..404166 (+)	684	WP_014416901.1	response regulator transcription factor	-
U2H13_RS02055 (U2H13_02055)	-	404153..405580 (+)	1428	WP_103527150.1	HAMP domain-containing sensor histidine kinase	-
U2H13_RS02060 (U2H13_02060)	rapC	405739..406887 (+)	1149	WP_014304340.1	Rap family tetratricopeptide repeat protein	Regulator
U2H13_RS02065 (U2H13_02065)	phrC	406871..406990 (+)	120	WP_103527149.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
U2H13_RS02070 (U2H13_02070)	-	407140..407250 (-)	111	WP_369878517.1	YjcZ family sporulation protein	-
U2H13_RS02075 (U2H13_02075)	-	407330..408694 (-)	1365	WP_014416903.1	aspartate kinase	-
U2H13_RS02080 (U2H13_02080)	ceuB	409108..410061 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
U2H13_RS02085 (U2H13_02085)	-	410051..410998 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
U2H13_RS02090 (U2H13_02090)	-	410992..411750 (+)	759	WP_022552588.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45494.75 Da
• Isoelectric Point: 4.9939

>NTDB_id=916220 U2H13_RS02060 WP_014304340.1 405739..406887(+) (rapC) [Bacillus sp. A1]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=916220 U2H13_RS02060 WP_014304340.1 405739..406887(+) (rapC) [Bacillus sp. A1]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAAGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGT
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

3D structure

• AlphaFold DB: I2C1C2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568