Detailed information NTG0916004

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: ABXV02_RS13835
• Genome accession: NZ_CP159912
• Coordinates: 2661183..2662208 (-)
• Length: 341 a.a.
• NCBI ID: WP_003245451.1
• Uniprot ID: O34470
• Organism: Bacillus subtilis strain PY79
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 2656183..2667208

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXV02_RS13800	panEA	2656668..2657564 (-)	897	WP_003232206.1	2-dehydropantoate 2-reductase	-
ABXV02_RS13805	ylbP	2657724..2658206 (+)	483	WP_003244940.1	N-acetyltransferase	-
ABXV02_RS13810	gerR	2658263..2658844 (-)	582	WP_003232210.1	sporulation specific transcriptional regulator GerR	-
ABXV02_RS13815	rpmF	2658990..2659169 (-)	180	WP_003154457.1	50S ribosomal protein L32	-
ABXV02_RS13820	ylbN	2659191..2659709 (-)	519	WP_003232214.1	DUF177 domain-containing protein	-
ABXV02_RS13825	-	2659737..2659922 (+)	186	WP_003232215.1	hypothetical protein	-
ABXV02_RS13830	tmcAL	2659919..2661166 (+)	1248	WP_003244707.1	nucleotidyltransferase	-
ABXV02_RS13835	sepM	2661183..2662208 (-)	1026	WP_003245451.1	protease DdcP	Regulator
ABXV02_RS13840	ylbK	2662210..2662992 (-)	783	WP_003232221.1	patatin family protein	-
ABXV02_RS13845	spoVV	2663173..2664399 (+)	1227	WP_003245492.1	dipicolinic acid transporter SpoVV	-
ABXV02_RS13850	coaD	2664410..2664895 (-)	486	WP_003245283.1	pantetheine-phosphate adenylyltransferase	-
ABXV02_RS13855	rsmD	2664900..2665454 (-)	555	WP_003232227.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ABXV02_RS13860	ylbG	2665777..2666049 (-)	273	WP_009967171.1	YlbG family protein	-
ABXV02_RS13865	ylbF	2666104..2666553 (-)	450	WP_003221370.1	regulatory iron-sulfur-containing complex subunit RicF	Regulator
ABXV02_RS13870	ylbE	2666669..2666908 (-)	240	WP_003232231.1	YlbE-like family protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37651.23 Da
• Isoelectric Point: 6.5347

>NTDB_id=916004 ABXV02_RS13835 WP_003245451.1 2661183..2662208(-) (sepM) [Bacillus subtilis strain PY79]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST

Nucleotide

• Length: 1026 bp

>NTDB_id=916004 ABXV02_RS13835 WP_003245451.1 2661183..2662208(-) (sepM) [Bacillus subtilis strain PY79]
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGTC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAATCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACGATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA

Domains

Predicted by InterProScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-331)

• Peptidase family M50 (Peptidase_M50) (59-220)

• PDZ domain (PDZ_2) (128-195)

3D structure

• PDB: 2KJP

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	39.143	100	0.402