Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   U6038_RS04445 Genome accession   NZ_CP140715
Coordinates   931942..932325 (+) Length   127 a.a.
NCBI ID   WP_004694493.1    Uniprot ID   A0A7H8SES6
Organism   Acinetobacter johnsonii strain FAHZZU3110hy     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 926942..937325
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U6038_RS04435 (U6038_04435) - 929838..930965 (-) 1128 WP_333655660.1 efflux RND transporter periplasmic adaptor subunit -
  U6038_RS04440 (U6038_04440) - 931023..931661 (-) 639 WP_058869160.1 hypothetical protein -
  U6038_RS04445 (U6038_04445) pilG 931942..932325 (+) 384 WP_004694493.1 twitching motility response regulator PilG Regulator
  U6038_RS04450 (U6038_04450) - 932353..932721 (+) 369 WP_004694491.1 response regulator -
  U6038_RS04455 (U6038_04455) - 932727..933263 (+) 537 WP_004694490.1 chemotaxis protein CheW -
  U6038_RS04460 (U6038_04460) - 933314..935386 (+) 2073 WP_333655663.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14184.23 Da        Isoelectric Point: 4.8722

>NTDB_id=915118 U6038_RS04445 WP_004694493.1 931942..932325(+) (pilG) [Acinetobacter johnsonii strain FAHZZU3110hy]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFDALSKIAQANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVVMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=915118 U6038_RS04445 WP_004694493.1 931942..932325(+) (pilG) [Acinetobacter johnsonii strain FAHZZU3110hy]
ATGGACGATAAATTCCAGAATCTAAAAGTAATGGTCATTGATGATTCAAAAACCATTCGTCGTACAGCTGAAACACTATT
GCAACGTGAAGGTTGTGAAGTGGTGACTGCAGTCGATGGTTTTGATGCATTGTCAAAAATTGCTCAAGCCAATCCTGATA
TCGTATTTGTCGACATTATGATGCCACGACTAGATGGTTATCAAACGTGTGCATTAATCAAAAATTCACAAAATTATCAA
AATATTCCTGTCGTAATGCTCTCTAGCAAAGATGGTCTATTTGACCAAGCCAAAGGGCGTGTTGTCGGTTCAGATGAATA
TTTAACAAAGCCGTTTAGTAAAGATGAATTATTAAATGCGATTCGTAATCACGTTTCAGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8SES6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

94.488

100

0.945
  vicR Streptococcus mutans UA159

39.316

92.126

0.362