Detailed information NTG0914867

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: S0I03_RS17240
• Genome accession: NZ_CP140613
• Coordinates: 3493073..3494236 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain WN-I
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3488073..3499236

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S0I03_RS17210	-	3488338..3488757 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
S0I03_RS17215	comFC	3488831..3489520 (-)	690	WP_197535984.1	ComF family protein	Machinery gene
S0I03_RS17220	-	3489526..3489810 (-)	285	WP_014419011.1	late competence development ComFB family protein	-
S0I03_RS17225	comFA	3489868..3491253 (-)	1386	WP_014419012.1	DEAD/DEAH box helicase	Machinery gene
S0I03_RS17230	-	3491361..3492209 (-)	849	WP_003151387.1	DegV family protein	-
S0I03_RS17235	degU	3492307..3492996 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
S0I03_RS17240	degS	3493073..3494236 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
S0I03_RS17245	-	3494459..3495106 (+)	648	WP_007614107.1	YigZ family protein	-
S0I03_RS17250	-	3495111..3496325 (+)	1215	WP_014419013.1	LCP family protein	-
S0I03_RS17255	-	3496415..3497491 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
S0I03_RS17260	tuaH	3497624..3498820 (-)	1197	WP_014419014.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=914867 S0I03_RS17240 WP_007407484.1 3493073..3494236(-) (degS) [Bacillus velezensis strain WN-I]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=914867 S0I03_RS17240 WP_007407484.1 3493073..3494236(-) (degS) [Bacillus velezensis strain WN-I]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTAGGTCTTCAGGAAATCATTGAAC
GGTCAGAATCGTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCTGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951