Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   L6430_RS14935 Genome accession   NZ_AP025342
Coordinates   2942053..2942514 (-) Length   153 a.a.
NCBI ID   WP_020451191.1    Uniprot ID   A0A6I7TMU9
Organism   Bacillus paralicheniformis strain J41TS8     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2937053..2947514
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6430_RS14910 - 2937391..2938571 (-) 1181 Protein_2901 aminotransferase A -
  L6430_RS14915 - 2938763..2938921 (-) 159 WP_165583461.1 hypothetical protein -
  L6430_RS14920 - 2939093..2939617 (+) 525 WP_020451188.1 RDD family protein -
  L6430_RS14925 - 2939714..2941033 (+) 1320 WP_020451189.1 MFS transporter -
  L6430_RS14930 - 2941107..2942024 (+) 918 WP_065644030.1 chemotaxis protein -
  L6430_RS14935 kre 2942053..2942514 (-) 462 WP_020451191.1 YkyB family protein Regulator
  L6430_RS14940 - 2942656..2943957 (-) 1302 WP_065644031.1 MFS transporter -
  L6430_RS14945 - 2944046..2944543 (-) 498 WP_081303567.1 L,D-transpeptidase family protein -
  L6430_RS14950 - 2944721..2945578 (-) 858 WP_065644032.1 metallophosphoesterase -
  L6430_RS14955 fadH 2945724..2946488 (+) 765 WP_065644033.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17573.37 Da        Isoelectric Point: 10.6730

>NTDB_id=91478 L6430_RS14935 WP_020451191.1 2942053..2942514(-) (kre) [Bacillus paralicheniformis strain J41TS8]
MDDHNHTKELKPTVENLSKAIYTVNRHAKTATNPKYLYLLKKKALQKLLNEGKGKKVGLHFSKNPRFSQQQSDVLISLGD
YFFHMPPTKEDFASLPHLGTLNHSYRNPKAHMSLNIAKQLLQNYTGIKEKPLVTNRKRPASKPVFKKLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=91478 L6430_RS14935 WP_020451191.1 2942053..2942514(-) (kre) [Bacillus paralicheniformis strain J41TS8]
ATGGACGACCATAATCATACGAAAGAATTAAAACCGACAGTTGAAAACCTTTCAAAAGCGATTTATACAGTTAATCGTCA
TGCGAAAACTGCGACTAATCCCAAATACCTGTATCTTCTGAAAAAGAAAGCTTTGCAAAAGCTGCTTAATGAAGGAAAGG
GTAAAAAGGTAGGACTTCACTTTTCGAAAAATCCAAGATTCAGCCAGCAGCAGTCAGATGTGCTGATTTCTCTCGGAGAC
TACTTTTTTCACATGCCTCCAACAAAAGAAGACTTCGCAAGCCTTCCACACTTAGGTACATTAAATCATTCGTATCGGAA
CCCTAAAGCTCATATGTCCTTGAATATAGCGAAACAGCTTCTTCAAAACTACACGGGAATTAAGGAAAAACCGCTCGTCA
CAAACCGGAAGCGCCCTGCCTCAAAGCCCGTCTTCAAGAAGCTTGGCGAAAGCTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7TMU9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

82.468

100

0.83

Multiple sequence alignment