Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SC851_RS05195 Genome accession   NZ_CP140606
Coordinates   1078585..1079859 (+) Length   424 a.a.
NCBI ID   WP_056960092.1    Uniprot ID   -
Organism   Ligilactobacillus murinus strain XYW20210915003     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1073585..1084859
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SC851_RS05160 (SC851_05135) - 1073691..1074017 (+) 327 WP_004048017.1 ribosomal-processing cysteine protease Prp -
  SC851_RS05165 (SC851_05140) rpmA 1074040..1074321 (+) 282 WP_004048016.1 50S ribosomal protein L27 -
  SC851_RS05170 (SC851_05145) - 1074495..1075373 (-) 879 WP_004048014.1 N-acetylmuramoyl-L-alanine amidase -
  SC851_RS05175 (SC851_05150) pyrH 1075587..1076309 (+) 723 WP_004048013.1 UMP kinase -
  SC851_RS05180 (SC851_05155) frr 1076318..1076881 (+) 564 WP_004048012.1 ribosome recycling factor -
  SC851_RS05185 (SC851_05160) - 1076987..1077763 (+) 777 WP_405258070.1 isoprenyl transferase -
  SC851_RS05190 (SC851_05165) - 1077763..1078551 (+) 789 WP_404387351.1 phosphatidate cytidylyltransferase -
  SC851_RS05195 (SC851_05170) eeP 1078585..1079859 (+) 1275 WP_056960092.1 RIP metalloprotease RseP Regulator
  SC851_RS05200 (SC851_05175) - 1079887..1081608 (+) 1722 WP_405258072.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 46722.69 Da        Isoelectric Point: 9.2692

>NTDB_id=914765 SC851_RS05195 WP_056960092.1 1078585..1079859(+) (eeP) [Ligilactobacillus murinus strain XYW20210915003]
MITTIITFIIVFGILVFVHEFGHYYFAKRAGILVREFAIGMGPKLFAYRKNGTTYTWRILPLGGYVSMAGLEDDTEELKK
GMPVSLITDENGVVQKINTSKKLTLVEGIPLELTDWDLTDGLWVEGYENGTEDEIKRFKVDHDALIIGKDGIELQIAPRD
VRFQSASLVDRMLTNFAGPLNNFLLAIVAFGLVAFLQGGVPVTTNTIAQVQTDSVAQKAGLKANDTIIAIDGAKTPTWDD
VAQHIRSADGKELVLTVKRADKKQNIKVTPVQKNVNGQKVAQIGIIAKGKMDRSIKAKLTYGFTQTWYVIKQLGNALASM
LHGFSLNDLGGPVAMFSLTSQAKENGLISVVTLTALLSVNLGIINLLPIPALDGGKLLLNIIEAIRRKPLDPEKEIIITM
IGFGFLMILMLLVTWNDIQRYFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=914765 SC851_RS05195 WP_056960092.1 1078585..1079859(+) (eeP) [Ligilactobacillus murinus strain XYW20210915003]
ATGATAACAACTATAATTACATTTATCATCGTCTTTGGGATCTTAGTATTTGTCCATGAATTTGGACACTATTATTTTGC
CAAACGTGCTGGGATCTTGGTCCGTGAATTTGCGATCGGGATGGGACCTAAACTGTTTGCATATCGCAAGAATGGCACGA
CCTATACTTGGCGGATCTTACCACTGGGTGGTTATGTCAGCATGGCAGGTTTGGAAGATGATACCGAAGAGCTAAAAAAA
GGGATGCCAGTCAGTTTGATCACTGACGAAAATGGTGTCGTTCAAAAGATAAATACTAGTAAAAAGCTCACTTTAGTCGA
AGGGATCCCGCTCGAATTGACTGACTGGGATCTAACGGATGGACTTTGGGTCGAAGGGTATGAAAACGGCACTGAAGATG
AGATCAAACGCTTCAAAGTTGATCACGATGCCTTGATCATCGGTAAAGATGGGATCGAACTGCAGATCGCACCACGTGAT
GTGCGTTTTCAGTCGGCTTCGTTAGTCGATCGGATGTTGACCAATTTTGCAGGGCCATTGAATAATTTCTTGTTAGCGAT
CGTAGCGTTTGGCTTAGTAGCCTTTTTACAGGGAGGGGTCCCTGTAACGACTAATACGATAGCTCAAGTTCAAACTGATT
CAGTTGCTCAAAAAGCAGGTCTAAAAGCAAATGATACGATCATTGCGATCGATGGTGCTAAAACACCGACTTGGGACGAT
GTGGCCCAACATATCAGATCAGCTGATGGCAAAGAACTTGTTTTAACAGTCAAACGAGCTGATAAAAAGCAAAATATCAA
AGTCACACCAGTCCAAAAAAACGTAAATGGACAAAAGGTCGCCCAGATTGGTATAATTGCTAAAGGAAAAATGGATCGTT
CTATCAAAGCCAAGCTGACTTATGGTTTTACCCAAACTTGGTATGTGATAAAACAGCTAGGAAATGCCTTAGCATCAATG
TTACACGGCTTTAGTCTAAATGATCTAGGTGGTCCAGTAGCAATGTTTTCCCTCACATCACAGGCTAAAGAAAATGGCCT
GATCAGTGTTGTGACACTAACAGCACTGTTGTCAGTTAACTTAGGGATCATCAACTTGTTACCGATTCCTGCTTTGGATG
GGGGCAAGTTGCTATTAAATATTATCGAAGCGATCAGAAGAAAACCACTTGATCCAGAAAAGGAGATCATTATCACAATG
ATCGGTTTTGGATTTTTGATGATCTTGATGCTTCTAGTTACGTGGAATGATATTCAACGCTATTTCTTCCGCTAA

Domains


Predicted by InterproScan.

(207-259)

(7-409)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.122

100

0.483

  eeP Streptococcus thermophilus LMD-9

47.887

100

0.481