Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   L6430_RS13435 Genome accession   NZ_AP025342
Coordinates   2663772..2663957 (+) Length   61 a.a.
NCBI ID   WP_011197761.1    Uniprot ID   A0A6I7TNH1
Organism   Bacillus paralicheniformis strain J41TS8     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2658772..2668957
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6430_RS13405 - 2659663..2660475 (-) 813 WP_020450925.1 undecaprenyl-diphosphate phosphatase -
  L6430_RS13410 - 2660657..2660836 (+) 180 WP_003180573.1 YjzC family protein -
  L6430_RS13415 - 2660900..2661094 (-) 195 WP_009328851.1 YjzD family protein -
  L6430_RS13420 - 2661326..2662060 (+) 735 WP_035338967.1 hypothetical protein -
  L6430_RS13425 - 2662147..2662722 (+) 576 WP_035338965.1 hypothetical protein -
  L6430_RS13430 med 2662808..2663761 (+) 954 WP_035338963.1 BMP family ABC transporter substrate-binding protein Regulator
  L6430_RS13435 comZ 2663772..2663957 (+) 186 WP_011197761.1 ComZ family protein Regulator
  L6430_RS13440 - 2664010..2664252 (-) 243 WP_003180586.1 hypothetical protein -
  L6430_RS13445 - 2664421..2665359 (+) 939 WP_003180588.1 beta-ketoacyl-ACP synthase III -
  L6430_RS13450 fabF 2665381..2666619 (+) 1239 WP_003180590.1 beta-ketoacyl-ACP synthase II -
  L6430_RS13455 - 2666894..2667487 (+) 594 WP_223254838.1 hypothetical protein -
  L6430_RS13460 - 2667696..2668484 (+) 789 WP_025808298.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 61 a.a.        Molecular weight: 6842.96 Da        Isoelectric Point: 4.2564

>NTDB_id=91470 L6430_RS13435 WP_011197761.1 2663772..2663957(+) (comZ) [Bacillus paralicheniformis strain J41TS8]
MHEKSMEFLQIAMKYVPEAKAEMEKAGIELSPEMLEPFMNLFTKVMAEAYELGKAEAGSDA

Nucleotide


Download         Length: 186 bp        

>NTDB_id=91470 L6430_RS13435 WP_011197761.1 2663772..2663957(+) (comZ) [Bacillus paralicheniformis strain J41TS8]
ATGCACGAAAAATCAATGGAATTTTTGCAAATTGCCATGAAGTACGTTCCGGAAGCGAAAGCAGAGATGGAGAAAGCGGG
AATCGAACTTTCCCCGGAAATGCTTGAGCCATTCATGAACTTGTTTACGAAAGTGATGGCCGAGGCTTACGAGCTCGGTA
AAGCGGAAGCCGGTTCAGACGCCTGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7TNH1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

73.333

98.361

0.721

Multiple sequence alignment