Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   L6430_RS13430 Genome accession   NZ_AP025342
Coordinates   2662808..2663761 (+) Length   317 a.a.
NCBI ID   WP_035338963.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain J41TS8     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2657808..2668761
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6430_RS13400 argF 2658675..2659625 (+) 951 WP_020450924.1 ornithine carbamoyltransferase -
  L6430_RS13405 - 2659663..2660475 (-) 813 WP_020450925.1 undecaprenyl-diphosphate phosphatase -
  L6430_RS13410 - 2660657..2660836 (+) 180 WP_003180573.1 YjzC family protein -
  L6430_RS13415 - 2660900..2661094 (-) 195 WP_009328851.1 YjzD family protein -
  L6430_RS13420 - 2661326..2662060 (+) 735 WP_035338967.1 hypothetical protein -
  L6430_RS13425 - 2662147..2662722 (+) 576 WP_035338965.1 hypothetical protein -
  L6430_RS13430 med 2662808..2663761 (+) 954 WP_035338963.1 BMP family ABC transporter substrate-binding protein Regulator
  L6430_RS13435 comZ 2663772..2663957 (+) 186 WP_011197761.1 ComZ family protein Regulator
  L6430_RS13440 - 2664010..2664252 (-) 243 WP_003180586.1 hypothetical protein -
  L6430_RS13445 - 2664421..2665359 (+) 939 WP_003180588.1 beta-ketoacyl-ACP synthase III -
  L6430_RS13450 fabF 2665381..2666619 (+) 1239 WP_003180590.1 beta-ketoacyl-ACP synthase II -
  L6430_RS13455 - 2666894..2667487 (+) 594 WP_223254838.1 hypothetical protein -
  L6430_RS13460 - 2667696..2668484 (+) 789 WP_025808298.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35439.14 Da        Isoelectric Point: 4.7166

>NTDB_id=91469 L6430_RS13430 WP_035338963.1 2662808..2663761(+) (med) [Bacillus paralicheniformis strain J41TS8]
MVYRLVAIFFILLALSGCGQSPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNDAAIKMAVED
FHKKGVNLIYGHGSEYEKAFNEICKDYPDIHFVLMNSKADHQNVTSISLEGEAMGFFGGMTAAHQSKTKKIGVLATYKWQ
PEVEGFSEGAKYLDPDIEVMTEYVGQWDDSENAVKLYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTMQHVDDAYELTADEFNKGTLKGGKRSFDIQDGVIEMGEFSPVVDQSFQEKMNRLIDEYKKTNKLPNEH

Nucleotide


Download         Length: 954 bp        

>NTDB_id=91469 L6430_RS13430 WP_035338963.1 2662808..2663761(+) (med) [Bacillus paralicheniformis strain J41TS8]
ATGGTGTACAGGCTTGTCGCGATTTTTTTCATTCTCCTGGCGCTAAGCGGCTGCGGACAATCGCCGCTGAAAGGGAAAAT
TGAAAAAGTCGGTTTGCTTGTCCCTGATACGATAAATGACCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAATCCGTCTACAATGTCGACGTCTATTATAAAGAGGGAATCGATAATGACGCTGCCATTAAAATGGCTGTAGAAGAT
TTTCACAAAAAAGGCGTCAACCTCATCTACGGGCACGGAAGCGAATATGAAAAAGCCTTTAATGAGATATGCAAAGATTA
TCCTGATATTCATTTTGTTTTAATGAACTCGAAAGCCGACCACCAAAATGTGACAAGCATATCGCTTGAAGGAGAAGCGA
TGGGGTTCTTCGGCGGAATGACGGCGGCCCATCAGTCAAAAACAAAGAAAATCGGCGTGCTCGCAACGTATAAATGGCAG
CCTGAAGTAGAAGGATTTTCCGAAGGGGCTAAATACCTCGATCCGGACATTGAGGTGATGACAGAATATGTCGGCCAGTG
GGACGACAGCGAAAATGCCGTCAAACTGTATGAAAAAATGAAGAAGGCAGGCGCGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAGGACGGGCTGTACGCTATCGGCTATGTAAGCGACCAGTCGGAATTG
GGTGAGAATGTCGTTTTGACAAGCACTATGCAGCATGTAGATGACGCTTATGAACTCACCGCCGACGAGTTTAATAAAGG
AACGCTTAAAGGCGGCAAGCGCTCATTTGACATTCAAGACGGCGTCATCGAAATGGGAGAATTCAGCCCTGTTGTCGATC
AGTCATTTCAAGAAAAGATGAATCGGCTGATTGACGAATACAAAAAAACAAACAAACTGCCAAACGAACATTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

68.153

99.054

0.675

Multiple sequence alignment