Detailed information
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | L6430_RS08590 | Genome accession | NZ_AP025342 |
| Coordinates | 1682727..1683173 (-) | Length | 148 a.a. |
| NCBI ID | WP_020450096.1 | Uniprot ID | - |
| Organism | Bacillus paralicheniformis strain J41TS8 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1677727..1688173
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6430_RS08565 | - | 1678334..1679209 (-) | 876 | WP_059230708.1 | transporter substrate-binding domain-containing protein | - |
| L6430_RS08570 | - | 1679393..1679944 (+) | 552 | WP_039073173.1 | NAD(P)H-dependent oxidoreductase | - |
| L6430_RS08575 | - | 1680040..1680765 (+) | 726 | WP_020450093.1 | AAA family ATPase | - |
| L6430_RS08580 | - | 1680835..1682271 (+) | 1437 | WP_059230706.1 | glycoside hydrolase family 1 protein | - |
| L6430_RS08585 | nin/comJ | 1682311..1682709 (-) | 399 | WP_059230704.1 | competence protein ComJ | Regulator |
| L6430_RS08590 | nucA/comI | 1682727..1683173 (-) | 447 | WP_020450096.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| L6430_RS08595 | - | 1683476..1683646 (+) | 171 | WP_023855671.1 | hypothetical protein | - |
| L6430_RS08600 | - | 1683652..1684455 (+) | 804 | WP_059230702.1 | serine/threonine protein kinase | - |
| L6430_RS08605 | - | 1684779..1685519 (-) | 741 | WP_059230700.1 | ribonuclease YeeF family protein | - |
| L6430_RS08610 | - | 1685923..1687977 (+) | 2055 | WP_059230698.1 | hydantoinase/oxoprolinase family protein | - |
Sequence
Protein
Download Length: 148 a.a. Molecular weight: 16280.32 Da Isoelectric Point: 5.7093
>NTDB_id=91458 L6430_RS08590 WP_020450096.1 1682727..1683173(-) (nucA/comI) [Bacillus paralicheniformis strain J41TS8]
MDKIKSLLITLLAVAVVIIGIISGDFFTSEHQPSGRQNGSDYDEVLIFPSDRYPETGAHIRKAIKKGHSKICTIDRDGAD
ERRKESLKDVPSKSGYDRDEWPMAMCEEGGTGASVEYISPSDNRGAGSWVGNQVSDYPDGTKILFKIK
MDKIKSLLITLLAVAVVIIGIISGDFFTSEHQPSGRQNGSDYDEVLIFPSDRYPETGAHIRKAIKKGHSKICTIDRDGAD
ERRKESLKDVPSKSGYDRDEWPMAMCEEGGTGASVEYISPSDNRGAGSWVGNQVSDYPDGTKILFKIK
Nucleotide
Download Length: 447 bp
>NTDB_id=91458 L6430_RS08590 WP_020450096.1 1682727..1683173(-) (nucA/comI) [Bacillus paralicheniformis strain J41TS8]
ATGGACAAAATTAAATCTTTGCTGATCACCTTGCTCGCCGTCGCCGTCGTGATCATCGGCATTATATCCGGCGATTTTTT
CACTTCAGAACACCAGCCTTCAGGCCGGCAAAACGGCTCAGACTATGATGAAGTGCTGATTTTCCCGTCGGACCGCTATC
CTGAAACAGGCGCGCACATTCGAAAGGCCATCAAGAAAGGGCATTCTAAAATCTGTACGATCGACAGGGACGGAGCCGAC
GAACGCCGAAAGGAATCGTTAAAAGATGTTCCTTCCAAATCGGGCTATGACCGCGACGAGTGGCCGATGGCCATGTGCGA
AGAAGGCGGAACAGGTGCTTCCGTCGAGTATATCAGTCCTTCTGATAACCGTGGAGCAGGATCTTGGGTGGGCAATCAGG
TAAGCGATTATCCGGACGGCACGAAAATACTTTTCAAGATTAAATAA
ATGGACAAAATTAAATCTTTGCTGATCACCTTGCTCGCCGTCGCCGTCGTGATCATCGGCATTATATCCGGCGATTTTTT
CACTTCAGAACACCAGCCTTCAGGCCGGCAAAACGGCTCAGACTATGATGAAGTGCTGATTTTCCCGTCGGACCGCTATC
CTGAAACAGGCGCGCACATTCGAAAGGCCATCAAGAAAGGGCATTCTAAAATCTGTACGATCGACAGGGACGGAGCCGAC
GAACGCCGAAAGGAATCGTTAAAAGATGTTCCTTCCAAATCGGGCTATGACCGCGACGAGTGGCCGATGGCCATGTGCGA
AGAAGGCGGAACAGGTGCTTCCGTCGAGTATATCAGTCCTTCTGATAACCGTGGAGCAGGATCTTGGGTGGGCAATCAGG
TAAGCGATTATCCGGACGGCACGAAAATACTTTTCAAGATTAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
63.946 |
99.324 |
0.635 |