Detailed information NTG0091458

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABK14_RS15630
• Genome accession: NZ_AP027886
• Coordinates: 3209642..3210667 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 2018-05-5CC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3204642..3215667

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABK14_RS15600 (VEE47_29940)	zapB	3204726..3204971 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
AABK14_RS15605 (VEE47_29950)	rraA	3205056..3205541 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABK14_RS15610 (VEE47_29960)	menA	3205634..3206560 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABK14_RS15615 (VEE47_29970)	hslU	3206627..3207958 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABK14_RS15620 (VEE47_29980)	hslV	3207968..3208498 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABK14_RS15625 (VEE47_29990)	ftsN	3208591..3209550 (-)	960	WP_000068828.1	cell division protein FtsN	-
AABK14_RS15630 (VEE47_30000)	cytR	3209642..3210667 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABK14_RS15635 (VEE47_30010)	priA	3210823..3213021 (-)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
AABK14_RS15640 (VEE47_30020)	rpmE	3213224..3213436 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
AABK14_RS15645 (VEE47_30030)	-	3213491..3214114 (-)	624	WP_000720774.1	TIGR02117 family protein	-
AABK14_RS15650 (VEE47_30040)	yiiX	3214121..3214729 (-)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
AABK14_RS15655 (VEE47_30050)	metJ	3214913..3215230 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=91458 AABK14_RS15630 WP_000644904.1 3209642..3210667(-) (cytR) [Escherichia coli strain 2018-05-5CC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=91458 AABK14_RS15630 WP_000644904.1 3209642..3210667(-) (cytR) [Escherichia coli strain 2018-05-5CC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628