Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | U4V76_RS05340 | Genome accession | NZ_CP140485 |
| Coordinates | 1024650..1024952 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain PNUSAC038549 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1019650..1029952
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U4V76_RS05315 (U4V76_05340) | rpsR | 1020012..1020272 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| U4V76_RS05320 (U4V76_05345) | lon | 1020333..1022708 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| U4V76_RS05325 (U4V76_05350) | - | 1022725..1023372 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| U4V76_RS05330 (U4V76_05355) | fliW | 1023533..1023922 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| U4V76_RS05335 (U4V76_05360) | proC | 1023922..1024653 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| U4V76_RS05340 (U4V76_05365) | ctsT | 1024650..1024952 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| U4V76_RS05345 (U4V76_05370) | - | 1024949..1025611 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| U4V76_RS05350 (U4V76_05375) | - | 1025608..1026060 (+) | 453 | WP_002894305.1 | hypothetical protein | - |
| U4V76_RS05355 (U4V76_05380) | hemD | 1026057..1026686 (-) | 630 | WP_002864257.1 | uroporphyrinogen-III synthase | - |
| U4V76_RS05360 (U4V76_05385) | thiE | 1026664..1027296 (-) | 633 | WP_002864256.1 | thiamine phosphate synthase | - |
| U4V76_RS05365 (U4V76_05390) | thiD | 1027286..1028098 (-) | 813 | WP_002894307.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| U4V76_RS05370 (U4V76_05395) | - | 1028095..1028781 (-) | 687 | WP_002869046.1 | 3-methyladenine DNA glycosylase | - |
| U4V76_RS05375 (U4V76_05400) | - | 1028778..1029539 (-) | 762 | WP_002894311.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=914484 U4V76_RS05340 WP_002853046.1 1024650..1024952(+) (ctsT) [Campylobacter jejuni strain PNUSAC038549]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=914484 U4V76_RS05340 WP_002853046.1 1024650..1024952(+) (ctsT) [Campylobacter jejuni strain PNUSAC038549]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |