Detailed information NTG0914164

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: U2S75_RS01700
• Genome accession: NZ_CP140420
• Coordinates: 353246..354106 (-)
• Length: 286 a.a.
• NCBI ID: WP_064191992.1
• Uniprot ID: A0A9P2L528
• Organism: Acinetobacter baumannii strain 2023CK-00893
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 348246..359106

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U2S75_RS01675 (U2S75_01675)	-	349138..350448 (+)	1311	WP_000753287.1	tetratricopeptide repeat protein	-
U2S75_RS01680 (U2S75_01680)	-	350525..350851 (+)	327	WP_000099685.1	pyrimidine/purine nucleoside phosphorylase	-
U2S75_RS01685 (U2S75_01685)	rlmB	350953..351702 (+)	750	WP_033853488.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
U2S75_RS01690 (U2S75_01690)	-	351738..352651 (+)	914	Protein_320	DMT family transporter	-
U2S75_RS01695 (U2S75_01695)	coaE	352648..353244 (-)	597	WP_000874125.1	dephospho-CoA kinase	-
U2S75_RS01700 (U2S75_01700)	pilD	353246..354106 (-)	861	WP_064191992.1	A24 family peptidase	Machinery gene
U2S75_RS01705 (U2S75_01705)	pilC	354106..355332 (-)	1227	WP_004842682.1	type II secretion system F family protein	Machinery gene
U2S75_RS01710 (U2S75_01710)	pilB	355362..357074 (-)	1713	WP_001274988.1	type IV-A pilus assembly ATPase PilB	Machinery gene
U2S75_RS01715 (U2S75_01715)	tpiA	357365..358159 (+)	795	WP_000016939.1	triose-phosphate isomerase	-
U2S75_RS01720 (U2S75_01720)	secG	358172..358501 (+)	330	WP_000555570.1	preprotein translocase subunit SecG	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32098.51 Da
• Isoelectric Point: 7.1041

>NTDB_id=914164 U2S75_RS01700 WP_064191992.1 353246..354106(-) (pilD) [Acinetobacter baumannii strain 2023CK-00893]
MQDIIAYFIQNLTALYIAVALVSLCIGSFLNVVIYRTPRMMEQDWQQECQMLLNPEQPIIDHEKLTLSKPASSCPACQQP
IRWYQNIPVISWLVLRGKCGHCQHPISIRYPAIELLTMLCSLVVVMVFGPTIQMLFGLILTWVLIALTFIDFDTQLLPDR
FTLPLAALGLGINTFNIYTSPNSAIWGYLIGFLCLWIVYYLFKVITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
LGAIIGIILLKLRNDNQPFAFGPYIAIAGWVAFLWGDQIMKIYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=914164 U2S75_RS01700 WP_064191992.1 353246..354106(-) (pilD) [Acinetobacter baumannii strain 2023CK-00893]
ATGCAAGACATCATTGCGTATTTTATTCAAAACTTAACTGCTCTTTATATTGCTGTTGCACTCGTGAGCCTATGTATCGG
TAGCTTTCTTAATGTAGTGATTTACCGCACGCCAAGAATGATGGAGCAAGATTGGCAGCAAGAATGCCAAATGCTGCTCA
ATCCTGAGCAACCGATTATTGATCATGAGAAGTTAACTTTAAGTAAGCCTGCTTCATCGTGCCCTGCATGTCAGCAACCG
ATCCGTTGGTATCAAAATATTCCTGTTATAAGCTGGCTTGTGTTAAGAGGAAAATGTGGTCATTGCCAGCACCCAATCAG
TATTCGCTATCCAGCCATCGAACTACTCACCATGCTATGTTCATTAGTAGTCGTCATGGTGTTTGGCCCAACCATACAAA
TGCTTTTTGGACTCATCCTCACATGGGTACTGATAGCCCTTACTTTTATTGATTTCGATACACAATTATTGCCTGATCGC
TTTACCTTACCTTTAGCTGCGCTCGGCTTAGGTATTAATACCTTTAATATTTATACCTCACCCAACTCAGCCATTTGGGG
TTATCTCATTGGTTTTCTATGTCTTTGGATTGTCTATTACTTATTTAAAGTGATCACTGGCAAAGAAGGTATGGGCTACG
GCGACTTTAAATTGCTTGCAGCATTAGGAGCATGGATGGGGCCATTGATGCTGCCGTTAATTGTGTTATTGTCATCGTTA
CTTGGCGCAATCATTGGCATCATTTTATTAAAATTAAGAAATGACAATCAGCCTTTTGCTTTTGGGCCATATATTGCCAT
TGCTGGTTGGGTTGCCTTTTTATGGGGTGATCAGATTATGAAAATTTATTTGGGAGGTTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (22-128)

• Type IV leader peptidase family (Peptidase_A24) (138-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter nosocomialis M2	98.951	100	0.99
pilD	Acinetobacter baumannii D1279779	98.601	100	0.986
pilD	Vibrio cholerae strain A1552	53.676	95.105	0.51
pilD	Vibrio campbellii strain DS40M4	52.399	94.755	0.497
pilD	Neisseria gonorrhoeae MS11	48.106	92.308	0.444