Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   U2S75_RS00850 Genome accession   NZ_CP140420
Coordinates   183586..184740 (-) Length   384 a.a.
NCBI ID   WP_064191933.1    Uniprot ID   A0A9P2LCJ5
Organism   Acinetobacter baumannii strain 2023CK-00893     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 178586..189740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U2S75_RS00830 (U2S75_00830) - 179747..180397 (+) 651 WP_001984979.1 TetR/AcrR family transcriptional regulator -
  U2S75_RS00835 (U2S75_00835) - 180503..181423 (+) 921 WP_000084546.1 DMT family transporter -
  U2S75_RS00840 (U2S75_00840) - 181815..182384 (-) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  U2S75_RS00845 (U2S75_00845) dprA 182435..183565 (-) 1131 WP_064191937.1 DNA-processing protein DprA Machinery gene
  U2S75_RS00850 (U2S75_00850) tsaP 183586..184740 (-) 1155 WP_064191933.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  U2S75_RS00855 (U2S75_00855) def 184863..185393 (+) 531 WP_001196539.1 peptide deformylase -
  U2S75_RS00860 (U2S75_00860) - 185430..185858 (+) 429 WP_064191934.1 DUF2946 family protein -
  U2S75_RS00865 (U2S75_00865) - 185931..188045 (+) 2115 WP_064191935.1 TonB-dependent copper receptor -
  U2S75_RS00870 (U2S75_00870) - 188099..188305 (+) 207 WP_000182542.1 hypothetical protein -
  U2S75_RS00875 (U2S75_00875) - 188375..189589 (-) 1215 WP_064191936.1 oxygenase MpaB family protein -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42312.19 Da        Isoelectric Point: 8.8713

>NTDB_id=914159 U2S75_RS00850 WP_064191933.1 183586..184740(-) (tsaP) [Acinetobacter baumannii strain 2023CK-00893]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCAGIIRRYTGQTTSLQPQVRVEALNNSVRVIPLEHIKQWLE
NSTILPADSITNTPYVVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGVQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYGYVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=914159 U2S75_RS00850 WP_064191933.1 183586..184740(-) (tsaP) [Acinetobacter baumannii strain 2023CK-00893]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCTTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCCCTTAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTGCAGGTATTATTCGCCGCTATACAGGTCAAACCACAAGCC
TACAACCACAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCGGGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGATTCAATTACCAACACACCTTATGTTGTTGGTACCGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACCATTTACGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAGTTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTTCGTCGTGGTGATCGTGTTATGCCTGA
AGAGCAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGTTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGACCGCGGTACAACCCAAGGCGTTCAAGTAGGCCAA
GTTTTTGATATTACCCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTAATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGGTTATGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

98.177

100

0.982