Detailed information NTG0913611

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: U3Q39_RS20235
• Genome accession: NZ_CP140298
• Coordinates: 4332628..4333902 (-)
• Length: 424 a.a.
• NCBI ID: WP_170799586.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain MJL19
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4327628..4338902

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U3Q39_RS20220 (U3Q39_020220)	rpoH	4329979..4330833 (-)	855	WP_011914994.1	RNA polymerase sigma factor RpoH	-
U3Q39_RS20225 (U3Q39_020225)	ftsX	4330944..4331963 (-)	1020	WP_011914995.1	permease-like cell division protein FtsX	-
U3Q39_RS20230 (U3Q39_020230)	ftsE	4331963..4332631 (-)	669	WP_011914996.1	cell division ATP-binding protein FtsE	-
U3Q39_RS20235 (U3Q39_020235)	pilA	4332628..4333902 (-)	1275	WP_170799586.1	signal recognition particle-docking protein FtsY	Machinery gene
U3Q39_RS20240 (U3Q39_020240)	-	4334130..4335482 (+)	1353	WP_020305643.1	M16 family metallopeptidase	-
U3Q39_RS20245 (U3Q39_020245)	-	4335475..4337016 (+)	1542	WP_014598017.1	M16 family metallopeptidase	-
U3Q39_RS20250 (U3Q39_020250)	rsmD	4337016..4337633 (+)	618	WP_011915000.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
U3Q39_RS20255 (U3Q39_020255)	-	4337627..4338031 (-)	405	WP_170799587.1	ribonucleotide reductase subunit alpha	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 45172.37 Da
• Isoelectric Point: 4.6925

>NTDB_id=913611 U3Q39_RS20235 WP_170799586.1 4332628..4333902(-) (pilA) [Stutzerimonas stutzeri strain MJL19]
MFGSNDDKKTPAEPGEKKGLFGWLRKKPQPASAEQPATEPQADSEPVEQTVANVETPAATPQHEEPHAVEADLQPTEVIE
SPLPDPVPEPEPEPEPEPEPVSAPVVAATSEAPAKLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLLDELETRLL
TADVGVEATTAIMQNLTRRVSRKELADSGALYTALQEELVGLLKPVEQPLAINAGKRPYVILVVGVNGVGKTTTIGKLAK
KLQLDGKKVMLAAGDTFRAAAVEQLQVWGERNGIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLME
ELKKVRRVMGKLDESAPHEVLLVLDAGTGQNAINQTRQFNQAVELTGLALTKLDGTAKGGVIFALAKQFGTPIRYIGVGE
GIDDLRTFEADAFVKALFAQREDA

Nucleotide

• Length: 1275 bp

>NTDB_id=913611 U3Q39_RS20235 WP_170799586.1 4332628..4333902(-) (pilA) [Stutzerimonas stutzeri strain MJL19]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGCCGAGCCCGGCGAGAAGAAAGGCCTGTTCGGCTGGCTGCGCAAGAA
GCCCCAGCCCGCTTCGGCAGAGCAGCCCGCCACCGAGCCTCAAGCGGACAGCGAACCGGTCGAGCAGACCGTGGCGAATG
TCGAAACGCCTGCCGCCACGCCGCAGCACGAGGAGCCTCACGCCGTCGAGGCCGATCTGCAGCCGACCGAGGTGATCGAG
TCGCCGCTGCCAGACCCTGTACCCGAACCCGAACCAGAGCCCGAACCAGAGCCCGAGCCGGTATCTGCCCCGGTCGTTGC
GGCCACGTCGGAAGCGCCGGCCAAGCTCGGCTTCTTCGCTCGCCTGCGCCAGGGTCTGTCGAAGACCAGCGCCAGCATCG
GCGAAGGCATGGCCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGACGATCTGCTCGACGAACTGGAAACCCGCCTGCTG
ACCGCCGACGTTGGCGTCGAGGCGACCACCGCGATCATGCAGAACCTCACCCGGCGCGTCTCGCGCAAGGAGCTGGCCGA
CAGCGGCGCGCTCTACACCGCGCTGCAGGAGGAGCTCGTCGGCCTGCTCAAGCCGGTCGAGCAGCCGCTGGCGATCAATG
CCGGCAAGCGTCCCTACGTGATCCTGGTGGTCGGCGTGAACGGCGTCGGCAAGACCACCACCATCGGCAAGCTGGCCAAG
AAACTGCAACTCGACGGCAAGAAGGTCATGCTCGCCGCCGGTGACACCTTCCGCGCCGCAGCGGTTGAGCAGCTGCAGGT
GTGGGGCGAGCGCAACGGCATCCCGGTGATCGCCCAGCACACCGGCGCGGATTCCGCCTCGGTGATCTTCGATGCCGTGC
AGGCCGCCAAGGCACGCGGCATCGACGTGCTGATCGCCGACACCGCCGGCCGCCTGCACACCAAGGACAACCTGATGGAA
GAGCTGAAGAAGGTCCGCCGAGTGATGGGCAAGCTCGACGAGTCGGCGCCACATGAGGTGCTGCTGGTGCTCGATGCCGG
TACCGGACAGAACGCCATCAACCAGACCCGCCAGTTCAACCAGGCGGTCGAGCTGACCGGGCTTGCGCTGACCAAGCTCG
ACGGCACCGCCAAGGGCGGCGTGATCTTCGCCCTGGCCAAGCAGTTCGGCACGCCGATCCGCTACATCGGCGTAGGCGAA
GGTATCGACGATCTGCGCACCTTCGAGGCCGATGCCTTCGTCAAGGCGCTGTTCGCCCAGCGGGAAGACGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (219-418)

• SRP54-type protein, helical bundle domain (SRP54_N) (134-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50	98.585	0.493