Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   U3Q39_RS20040 Genome accession   NZ_CP140298
Coordinates   4294795..4295202 (-) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri strain MJL19     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4289795..4300202
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U3Q39_RS20020 (U3Q39_020020) - 4290753..4291619 (-) 867 WP_043942369.1 CheR family methyltransferase -
  U3Q39_RS20025 (U3Q39_020025) - 4291680..4293728 (-) 2049 WP_020305670.1 methyl-accepting chemotaxis protein -
  U3Q39_RS20030 (U3Q39_020030) - 4293807..4294343 (-) 537 WP_020305669.1 chemotaxis protein CheW -
  U3Q39_RS20035 (U3Q39_020035) pilH 4294385..4294750 (-) 366 WP_003297216.1 twitching motility response regulator PilH -
  U3Q39_RS20040 (U3Q39_020040) pilG 4294795..4295202 (-) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  U3Q39_RS20045 (U3Q39_020045) gshB 4295439..4296389 (+) 951 WP_014597995.1 glutathione synthase -
  U3Q39_RS20050 (U3Q39_020050) - 4296477..4297370 (+) 894 WP_019405529.1 energy transducer TonB -
  U3Q39_RS20055 (U3Q39_020055) - 4297436..4298005 (+) 570 WP_125872064.1 YqgE/AlgH family protein -
  U3Q39_RS20060 (U3Q39_020060) ruvX 4298002..4298430 (+) 429 WP_011914962.1 Holliday junction resolvase RuvX -
  U3Q39_RS20065 (U3Q39_020065) pyrR 4298448..4298963 (+) 516 WP_014597998.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  U3Q39_RS20070 (U3Q39_020070) - 4299017..4300033 (+) 1017 WP_011914964.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=913608 U3Q39_RS20040 WP_003282729.1 4294795..4295202(-) (pilG) [Stutzerimonas stutzeri strain MJL19]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=913608 U3Q39_RS20040 WP_003282729.1 4294795..4295202(-) (pilG) [Stutzerimonas stutzeri strain MJL19]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCAGTGGACGGTTTCGATGCCCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTTGTCGATATTATGATGCCCAGGCTGGACGGTTATCAGACCTGCGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCAGTGATCATGCTGTCTTCCAAAGACGGCCTGTTCGACAAGGCGAAGGGGCGCATTGTCGGCTCCGATCAATA
CCTCACCAAACCGTTCAGCAAAGAAGAGCTGCTCGGTGCAATCAAGGCTCATGTCCCTGATTTCGCGCCGGTGGAGCAAG
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4