Detailed information NTG0913593

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: U3Q39_RS07360
• Genome accession: NZ_CP140298
• Coordinates: 1522947..1525172 (+)
• Length: 741 a.a.
• NCBI ID: WP_170801305.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain MJL19
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1517947..1530172

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U3Q39_RS07330 (U3Q39_007330)	-	1518097..1518405 (-)	309	WP_011913753.1	hypothetical protein	-
U3Q39_RS07335 (U3Q39_007335)	-	1518409..1519044 (-)	636	WP_170801307.1	PilZ domain-containing protein	-
U3Q39_RS07340 (U3Q39_007340)	-	1519077..1520324 (+)	1248	WP_020307157.1	lipoprotein-releasing ABC transporter permease subunit	-
U3Q39_RS07345 (U3Q39_007345)	lolD	1520332..1521030 (+)	699	WP_013983263.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
U3Q39_RS07350 (U3Q39_007350)	-	1521030..1522274 (+)	1245	WP_170801330.1	lipoprotein-releasing ABC transporter permease subunit	-
U3Q39_RS07355 (U3Q39_007355)	-	1522287..1522802 (-)	516	WP_011913748.1	DUF2062 domain-containing protein	-
U3Q39_RS07360 (U3Q39_007360)	comA	1522947..1525172 (+)	2226	WP_170801305.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
U3Q39_RS07365 (U3Q39_007365)	-	1525244..1525876 (+)	633	WP_013983260.1	MotA/TolQ/ExbB proton channel family protein	-
U3Q39_RS07370 (U3Q39_007370)	-	1525873..1526301 (+)	429	WP_079329150.1	ExbD/TolR family protein	-
U3Q39_RS07375 (U3Q39_007375)	lpxK	1526301..1527305 (+)	1005	WP_170801303.1	tetraacyldisaccharide 4'-kinase	-
U3Q39_RS07380 (U3Q39_007380)	-	1527351..1527536 (+)	186	WP_011913743.1	Trm112 family protein	-
U3Q39_RS07385 (U3Q39_007385)	kdsB	1527533..1528297 (+)	765	WP_170801301.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
U3Q39_RS07390 (U3Q39_007390)	-	1528299..1528766 (+)	468	WP_014597103.1	low molecular weight protein-tyrosine-phosphatase	-
U3Q39_RS07395 (U3Q39_007395)	murB	1528763..1529782 (+)	1020	WP_079329147.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 81083.73 Da
• Isoelectric Point: 10.1108

>NTDB_id=913593 U3Q39_RS07360 WP_170801305.1 1522947..1525172(+) (comA) [Stutzerimonas stutzeri strain MJL19]
MRTWMLALAAGLVLPRFLPALPAQWFCAALVAVGLLLLLRHRWVAPGLFLLGLSWACYQSQSAIDDRLPATMDGRTFWIE
GRVVGLPSRIGNVVRFELDDIQSRHAGLPSKVRLSWYDGPQLQAGERWRLAARLKRPHGMVNPHAFDYEAWLLARRIGAT
GTIKAGERLTASAASDGWRDQLRARLMAVPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALLARLGAWPRRLPWLPWACGLALSGALAYGWLAGFDVPVRRACLMVTVVLVWRLRFRHLGVWLPLLLALDGVLLI
DPLVTLQPGFWLSFGAVAVLALAFSGRLGSWRWWMALTRAQWAATLGLLPLLLALGLPVSASGPLANLLAVPWVSLTVPF
ALLGTLLLPVAGVGEALLSVVGYSLALLFDVLAAIANWQPAWIAVGLPVWALALIGLGVLLLLLPAGIPLRSLGLLLLLP
LAFPPRVEMPDGRAQVWVLDVGQGLAVLVRTREHALLYDAGPKQGDFDTGERVVVPSLRTLGVTRLDLLLLSHADNDHSG
GAHAVQRLLRVDRVVSGEPSRLAPDLGAERCESGSSWQWNDVRFSLWQWQMARDSNQQSCVLQIEANGERILLTGDIDQA
AEQAWLVSEQRTPSHWLLLPHHGSRSSSSEPFLRGVASHAALISRSLHNAFGHPHPSVVERLEILDIRAYDTALHGAIRI
ELGSFSPPRLQRSQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=913593 U3Q39_RS07360 WP_170801305.1 1522947..1525172(+) (comA) [Stutzerimonas stutzeri strain MJL19]
ATGCGCACATGGATGCTTGCGCTCGCCGCGGGTCTGGTCCTGCCACGCTTCCTTCCTGCCTTGCCCGCGCAGTGGTTCTG
TGCGGCGCTGGTGGCTGTCGGACTGCTGCTCCTGCTGCGTCACCGCTGGGTGGCGCCGGGCTTGTTTCTGCTGGGCTTGA
GCTGGGCCTGCTACCAGAGCCAGAGCGCCATCGACGACCGCTTACCGGCGACCATGGACGGTCGCACCTTTTGGATCGAG
GGGCGGGTAGTGGGGTTGCCCAGTCGTATCGGCAATGTGGTGCGCTTCGAGCTCGACGACATCCAATCGCGGCATGCCGG
GTTGCCATCGAAGGTGCGGCTGTCCTGGTATGACGGTCCGCAGCTACAAGCCGGCGAGCGCTGGCGCCTGGCGGCGCGAC
TGAAGCGACCGCATGGCATGGTCAATCCCCACGCCTTCGATTACGAAGCCTGGTTGCTGGCGCGACGCATCGGCGCCACG
GGCACGATAAAGGCGGGCGAGCGCCTGACGGCGTCGGCGGCAAGCGACGGATGGCGCGATCAGCTTCGGGCGCGGCTCAT
GGCCGTTCCGGCATCCGATCGGCAGGGCGCCATCGCGGCACTGGTGGTGGGTGACGATTCCGGTTTGAGCCGCGGCGACT
GGCAGGTGTTGCAGGACACCGGCACCGTCCACCTGATGGTCATCTCCGGACAGCACATCGGCATGCTGGCGGGGCTGCTC
TATGGTCTGGTCGCATTGCTGGCTCGCCTGGGTGCGTGGCCGCGGCGGTTGCCCTGGTTGCCCTGGGCGTGCGGGCTGGC
GTTAAGCGGTGCGCTGGCCTATGGCTGGCTGGCCGGTTTCGATGTGCCGGTGCGTCGTGCCTGCCTGATGGTGACGGTGG
TGCTTGTCTGGCGATTGCGCTTTCGCCACCTGGGTGTCTGGTTGCCGCTGCTGCTGGCGCTCGATGGCGTCCTGCTGATC
GATCCTCTGGTGACATTGCAGCCGGGGTTCTGGCTGTCGTTTGGAGCGGTGGCGGTTCTGGCATTGGCGTTCTCGGGGCG
GCTCGGCTCATGGCGCTGGTGGATGGCGCTGACCCGGGCGCAGTGGGCGGCCACCCTTGGTCTGCTTCCGCTGTTGCTGG
CCCTCGGACTGCCGGTAAGTGCGAGCGGGCCGCTGGCCAATCTGCTTGCCGTACCCTGGGTGAGTCTGACCGTGCCCTTT
GCGTTGCTCGGTACGCTCCTGCTGCCCGTGGCCGGGGTTGGCGAAGCGCTGCTGTCGGTGGTGGGCTATTCGCTGGCATT
GCTGTTCGACGTCCTGGCGGCGATAGCCAATTGGCAACCCGCCTGGATTGCGGTCGGCCTGCCCGTCTGGGCGCTGGCGT
TAATCGGGCTGGGCGTCCTGTTGCTGTTGCTGCCCGCGGGTATTCCGCTGCGTTCGCTGGGTTTGCTGCTGCTGTTGCCG
CTGGCGTTCCCGCCTCGTGTCGAGATGCCAGACGGCCGGGCGCAGGTCTGGGTATTGGATGTGGGGCAGGGCCTGGCGGT
GCTTGTACGCACCCGCGAGCATGCACTGCTCTACGATGCCGGGCCGAAGCAGGGCGACTTCGATACGGGCGAGCGGGTGG
TCGTCCCTTCGCTCCGGACCCTTGGCGTGACTCGGTTGGATCTGCTGTTGCTGAGTCATGCCGATAATGATCATTCGGGC
GGTGCGCACGCGGTTCAGCGGTTGCTGAGGGTTGATCGGGTGGTCAGTGGCGAGCCGTCGCGCCTTGCGCCTGATCTGGG
CGCCGAACGTTGCGAAAGCGGTAGCAGCTGGCAGTGGAACGACGTGCGCTTCAGTCTGTGGCAATGGCAGATGGCACGCG
ACAGCAATCAGCAGTCCTGCGTGCTGCAAATCGAGGCCAATGGTGAGCGGATCCTGCTCACCGGCGACATCGACCAGGCC
GCGGAGCAGGCATGGCTGGTAAGCGAACAGCGCACCCCATCGCACTGGCTGTTACTGCCCCACCATGGCAGCCGCAGCTC
GTCGTCAGAACCGTTTCTGCGCGGCGTCGCCTCCCATGCCGCGCTGATCTCGCGCAGCCTGCACAATGCCTTCGGACACC
CACACCCAAGCGTGGTCGAGCGGCTCGAGATCCTCGATATCCGGGCCTACGACACCGCCTTGCATGGCGCAATCCGCATA
GAGCTGGGAAGCTTTTCGCCTCCTCGGCTACAACGTTCGCAGCGACGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-674)

• Competence protein (Competence) (201-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.087	96.356	0.646
comA	Ralstonia pseudosolanacearum GMI1000	37.29	100	0.39