Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   U3P88_RS18895 Genome accession   NZ_CP140297
Coordinates   3876824..3877015 (+) Length   63 a.a.
NCBI ID   WP_061861349.1    Uniprot ID   -
Organism   Bacillus velezensis strain UMAF6639     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3871824..3882015
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U3P88_RS18865 (U3P88_18865) - 3872434..3872613 (+) 180 WP_003155070.1 YjzC family protein -
  U3P88_RS18870 (U3P88_18870) - 3872729..3873879 (+) 1151 WP_094031235.1 IS3 family transposase -
  U3P88_RS18875 (U3P88_18875) - 3873939..3874124 (-) 186 WP_007409129.1 YjzD family protein -
  U3P88_RS18880 (U3P88_18880) - 3874385..3875119 (+) 735 WP_015417203.1 hypothetical protein -
  U3P88_RS18885 (U3P88_18885) - 3875202..3875768 (+) 567 WP_015417204.1 NAD(P) binding enzyme -
  U3P88_RS18890 (U3P88_18890) med 3875858..3876811 (+) 954 WP_015417205.1 BMP family ABC transporter substrate-binding protein Regulator
  U3P88_RS18895 (U3P88_18895) comZ 3876824..3877015 (+) 192 WP_061861349.1 ComZ family protein Regulator
  U3P88_RS18900 (U3P88_18900) - 3877044..3877262 (-) 219 WP_007409123.1 hypothetical protein -
  U3P88_RS18905 (U3P88_18905) - 3877430..3878368 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  U3P88_RS18910 (U3P88_18910) fabF 3878391..3879629 (+) 1239 WP_015417206.1 beta-ketoacyl-ACP synthase II -
  U3P88_RS18915 (U3P88_18915) - 3879712..3880497 (+) 786 WP_061861350.1 DUF2268 domain-containing protein -
  U3P88_RS18920 (U3P88_18920) - 3880671..3881657 (+) 987 WP_012117279.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7231.38 Da        Isoelectric Point: 4.2259

>NTDB_id=913576 U3P88_RS18895 WP_061861349.1 3876824..3877015(+) (comZ) [Bacillus velezensis strain UMAF6639]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMVEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=913576 U3P88_RS18895 WP_061861349.1 3876824..3877015(+) (comZ) [Bacillus velezensis strain UMAF6639]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGTGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

84.483

92.063

0.778