Detailed information NTG0913575

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: U3P88_RS18890
• Genome accession: NZ_CP140297
• Coordinates: 3875858..3876811 (+)
• Length: 317 a.a.
• NCBI ID: WP_015417205.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain UMAF6639
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 3870858..3881811

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U3P88_RS18860 (U3P88_18860)	argF	3871387..3872358 (+)	972	WP_031378491.1	ornithine carbamoyltransferase	-
U3P88_RS18865 (U3P88_18865)	-	3872434..3872613 (+)	180	WP_003155070.1	YjzC family protein	-
U3P88_RS18870 (U3P88_18870)	-	3872729..3873879 (+)	1151	WP_094031235.1	IS3 family transposase	-
U3P88_RS18875 (U3P88_18875)	-	3873939..3874124 (-)	186	WP_007409129.1	YjzD family protein	-
U3P88_RS18880 (U3P88_18880)	-	3874385..3875119 (+)	735	WP_015417203.1	hypothetical protein	-
U3P88_RS18885 (U3P88_18885)	-	3875202..3875768 (+)	567	WP_015417204.1	NAD(P) binding enzyme	-
U3P88_RS18890 (U3P88_18890)	med	3875858..3876811 (+)	954	WP_015417205.1	BMP family ABC transporter substrate-binding protein	Regulator
U3P88_RS18895 (U3P88_18895)	comZ	3876824..3877015 (+)	192	WP_061861349.1	ComZ family protein	Regulator
U3P88_RS18900 (U3P88_18900)	-	3877044..3877262 (-)	219	WP_007409123.1	hypothetical protein	-
U3P88_RS18905 (U3P88_18905)	-	3877430..3878368 (+)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
U3P88_RS18910 (U3P88_18910)	fabF	3878391..3879629 (+)	1239	WP_015417206.1	beta-ketoacyl-ACP synthase II	-
U3P88_RS18915 (U3P88_18915)	-	3879712..3880497 (+)	786	WP_061861350.1	DUF2268 domain-containing protein	-
U3P88_RS18920 (U3P88_18920)	-	3880671..3881657 (+)	987	WP_012117279.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35328.96 Da
• Isoelectric Point: 4.6686

>NTDB_id=913575 U3P88_RS18890 WP_015417205.1 3875858..3876811(+) (med) [Bacillus velezensis strain UMAF6639]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGSLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=913575 U3P88_RS18890 WP_015417205.1 3875858..3876811(+) (med) [Bacillus velezensis strain UMAF6639]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAACAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TTCGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.233	100	0.782