Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   U0N78_RS03715 Genome accession   NZ_CP140109
Coordinates   754018..754821 (+) Length   267 a.a.
NCBI ID   WP_024378370.1    Uniprot ID   -
Organism   Streptococcus suis strain 2022WUSS148     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 749018..759821
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U0N78_RS03690 (U0N78_03690) - 749447..750145 (-) 699 WP_004298848.1 amino acid ABC transporter permease -
  U0N78_RS03695 (U0N78_03695) - 750160..750999 (-) 840 WP_170238280.1 transporter substrate-binding domain-containing protein -
  U0N78_RS03700 (U0N78_03700) - 751010..751771 (-) 762 WP_170238279.1 amino acid ABC transporter ATP-binding protein -
  U0N78_RS03705 (U0N78_03705) micA 751965..752669 (+) 705 WP_004298854.1 response regulator YycF Regulator
  U0N78_RS03710 (U0N78_03710) micB 752662..754011 (+) 1350 WP_170238278.1 cell wall metabolism sensor histidine kinase VicK Regulator
  U0N78_RS03715 (U0N78_03715) vicX 754018..754821 (+) 804 WP_024378370.1 MBL fold metallo-hydrolase Regulator
  U0N78_RS03720 (U0N78_03720) vga(F) 755352..756737 (+) 1386 WP_032499500.1 ABC-F type ribosomal protection protein Vga(F) -
  U0N78_RS03725 (U0N78_03725) pbp2b 756829..758901 (+) 2073 WP_256769083.1 penicillin-binding protein PBP2B -
  U0N78_RS03730 (U0N78_03730) recR 758910..759506 (+) 597 WP_012027296.1 recombination mediator RecR -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29586.66 Da        Isoelectric Point: 5.9833

>NTDB_id=912578 U0N78_RS03715 WP_024378370.1 754018..754821(+) (vicX) [Streptococcus suis strain 2022WUSS148]
MIGKGFNYSILASGSSGNCFYLETDKKKILVDAGLSGKKITSLLAEIDRKPEDIDAILVTHEHSDHIHGIGVLARKYGMD
IYANELTWQAMESKLGKIEQAQKHIFELGAMKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIV
ANADAYLIESNHDVEILRAGSYSWNLKQRILSDKGHLCNEDGADAMIRSLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLGVGVDFQVYDTSPDTATPLTKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=912578 U0N78_RS03715 WP_024378370.1 754018..754821(+) (vicX) [Streptococcus suis strain 2022WUSS148]
ATGATCGGAAAAGGATTTAACTACAGTATTTTGGCTTCGGGATCTAGTGGAAACTGTTTCTATTTGGAAACGGATAAGAA
GAAAATCTTGGTAGATGCTGGCCTATCAGGAAAAAAGATTACTAGCCTTTTGGCAGAAATTGACCGCAAGCCAGAAGATA
TTGATGCGATTTTAGTCACCCATGAGCATAGCGACCATATCCATGGTATCGGTGTTCTGGCACGTAAATATGGTATGGAT
ATTTATGCCAATGAGTTGACTTGGCAGGCAATGGAAAGCAAATTGGGTAAGATTGAACAGGCTCAAAAACATATCTTTGA
ATTGGGGGCTATGAAGACTTTTGGTGACCTAGATATTGAGTCATTTGGTGTCAGTCATGATGCGGCCTGTCCTCAATTTT
ATCGTTTTATGAAGGATGATAAGTCCTTTGTTATGTTAACGGATACTGGCTATGTCAGCGATCGGATGGCAGGGATTGTA
GCCAATGCAGATGCCTATTTGATTGAGTCGAACCATGATGTTGAAATCTTGCGTGCGGGTTCTTACTCTTGGAACCTCAA
GCAACGGATTTTGTCTGATAAGGGGCACCTTTGTAACGAGGATGGTGCTGATGCCATGATTCGATCACTAGGAAATCGGA
CTAAAAAGATTTACCTTGGGCATTTATCAAAGGAAAACAATATCAAGGAATTGGCTCACATGACCATGGTTAATCAGTTG
GCGCAGGCTGATTTAGGAGTTGGAGTGGATTTCCAGGTCTATGATACCTCGCCAGACACAGCGACTCCCTTGACCAAGAT
TTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.655

100

0.757