Detailed information
Bioinformatically predicted
Overview
| Name | clpX | Type | Regulator |
| Locus tag | L6419_RS05425 | Genome accession | NZ_AP025332 |
| Coordinates | 1123636..1124862 (+) | Length | 408 a.a. |
| NCBI ID | WP_024532031.1 | Uniprot ID | A0A2Z5TMW9 |
| Organism | Streptococcus ruminantium strain GUT-184 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1118636..1129862
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6419_RS05400 (GUT184_10170) | - | 1119521..1119856 (+) | 336 | WP_155997750.1 | hypothetical protein | - |
| L6419_RS05405 (GUT184_10180) | - | 1120059..1121018 (+) | 960 | WP_237375087.1 | ROK family glucokinase | - |
| L6419_RS05410 (GUT184_10190) | - | 1121433..1121621 (+) | 189 | WP_237375089.1 | hypothetical protein | - |
| L6419_RS05415 (GUT184_10200) | - | 1121673..1122512 (+) | 840 | WP_024532029.1 | thymidylate synthase | - |
| L6419_RS05420 (GUT184_10210) | - | 1122924..1123436 (+) | 513 | WP_237375091.1 | dihydrofolate reductase | - |
| L6419_RS05425 (GUT184_10220) | clpX | 1123636..1124862 (+) | 1227 | WP_024532031.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| L6419_RS05430 (GUT184_10230) | yihA | 1124922..1125509 (+) | 588 | WP_024532032.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| L6419_RS05435 (GUT184_10240) | lepA | 1125720..1127552 (+) | 1833 | WP_156019143.1 | translation elongation factor 4 | - |
| L6419_RS05440 (GUT184_10250) | - | 1127626..1127808 (-) | 183 | WP_120171717.1 | 4-oxalocrotonate tautomerase | - |
| L6419_RS05445 (GUT184_10260) | - | 1127941..1129257 (+) | 1317 | WP_237375094.1 | excalibur calcium-binding domain-containing protein | - |
Sequence
Protein
Download Length: 408 a.a. Molecular weight: 45410.93 Da Isoelectric Point: 4.6108
>NTDB_id=91185 L6419_RS05425 WP_024532031.1 1123636..1124862(+) (clpX) [Streptococcus ruminantium strain GUT-184]
MAVKHTHELIYCSFCGKNQEEVKKIIAGNNVFICNECVELAQEIIREELAEEVLTDLADTPKPQELLNILNNYVIGQDRA
KRALAVAVYNHYKRINFQDSRDDNDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVENIL
LKLLQAADFNIDRAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIHVDTKN
ILFIVGGAFDGIEEIVKQRLGEKIIGFGQNNRAIDEKESYMQHIIADDIQKFGIIPELIGRLPVFAALDQLTTEDLIRIL
TEPKNALVKQYQTLLSYDDVELEFDEDALEEIAKKAIERKTGARGLRSIIEETMLDVMFEVPGQDEVKRVRVTKAAVNGK
EKPLLETA
MAVKHTHELIYCSFCGKNQEEVKKIIAGNNVFICNECVELAQEIIREELAEEVLTDLADTPKPQELLNILNNYVIGQDRA
KRALAVAVYNHYKRINFQDSRDDNDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVENIL
LKLLQAADFNIDRAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIHVDTKN
ILFIVGGAFDGIEEIVKQRLGEKIIGFGQNNRAIDEKESYMQHIIADDIQKFGIIPELIGRLPVFAALDQLTTEDLIRIL
TEPKNALVKQYQTLLSYDDVELEFDEDALEEIAKKAIERKTGARGLRSIIEETMLDVMFEVPGQDEVKRVRVTKAAVNGK
EKPLLETA
Nucleotide
Download Length: 1227 bp
>NTDB_id=91185 L6419_RS05425 WP_024532031.1 1123636..1124862(+) (clpX) [Streptococcus ruminantium strain GUT-184]
ATGGCTGTTAAGCATACACATGAGCTTATTTACTGCTCATTTTGTGGAAAAAATCAAGAAGAAGTCAAAAAAATTATTGC
CGGAAACAATGTATTTATCTGTAACGAATGTGTCGAATTAGCACAAGAAATCATTCGTGAGGAATTGGCAGAAGAAGTTC
TAACAGACTTGGCTGATACGCCAAAACCACAGGAATTATTAAATATCCTAAACAACTATGTCATCGGACAAGACCGGGCG
AAACGTGCGCTGGCAGTGGCGGTTTATAACCACTATAAACGAATCAATTTTCAAGACAGTCGTGATGATAATGATGTTGA
TTTACAAAAATCAAATATCCTCATGATTGGACCAACTGGATCTGGTAAAACCTTCTTAGCACAGACTCTCGCTAAAAGTT
TGAATGTACCATTTGCGATTGCAGATGCCACAGCCTTGACAGAAGCAGGTTATGTTGGTGAGGATGTAGAAAATATCCTT
CTCAAACTCTTGCAGGCGGCAGATTTCAATATTGACCGTGCAGAAAGAGGAATTATCTATGTGGATGAAATTGATAAAAT
TGCCAAAAAAGGTGAAAACGTGTCCATTACGCGGGATGTATCTGGTGAAGGTGTTCAGCAGGCTCTCCTAAAAATTATCG
AGGGGACAGTTGCTAGCGTACCACCACAGGGAGGACGTAAACATCCAAACCAAGAGATGATCCATGTAGACACCAAGAAC
ATCCTCTTCATCGTAGGTGGTGCTTTTGATGGTATTGAGGAAATTGTTAAACAACGTCTCGGCGAAAAAATTATTGGATT
TGGTCAGAATAATCGTGCCATTGATGAAAAAGAATCCTACATGCAGCATATTATCGCTGATGATATTCAAAAATTTGGTA
TCATTCCAGAATTGATTGGTCGTTTACCAGTTTTTGCAGCTCTGGATCAACTGACAACAGAGGATTTGATTCGCATTCTG
ACTGAACCTAAAAATGCTCTTGTGAAGCAATACCAAACGCTCCTTTCGTACGATGATGTGGAATTAGAATTTGACGAGGA
TGCTTTGGAGGAAATTGCTAAAAAAGCAATTGAGCGTAAAACAGGTGCTCGTGGTCTTCGCTCCATTATTGAGGAAACAA
TGCTGGATGTCATGTTTGAAGTGCCGGGTCAAGATGAGGTTAAGCGTGTTCGAGTAACCAAAGCTGCAGTAAATGGCAAG
GAAAAGCCACTACTAGAAACTGCTTAA
ATGGCTGTTAAGCATACACATGAGCTTATTTACTGCTCATTTTGTGGAAAAAATCAAGAAGAAGTCAAAAAAATTATTGC
CGGAAACAATGTATTTATCTGTAACGAATGTGTCGAATTAGCACAAGAAATCATTCGTGAGGAATTGGCAGAAGAAGTTC
TAACAGACTTGGCTGATACGCCAAAACCACAGGAATTATTAAATATCCTAAACAACTATGTCATCGGACAAGACCGGGCG
AAACGTGCGCTGGCAGTGGCGGTTTATAACCACTATAAACGAATCAATTTTCAAGACAGTCGTGATGATAATGATGTTGA
TTTACAAAAATCAAATATCCTCATGATTGGACCAACTGGATCTGGTAAAACCTTCTTAGCACAGACTCTCGCTAAAAGTT
TGAATGTACCATTTGCGATTGCAGATGCCACAGCCTTGACAGAAGCAGGTTATGTTGGTGAGGATGTAGAAAATATCCTT
CTCAAACTCTTGCAGGCGGCAGATTTCAATATTGACCGTGCAGAAAGAGGAATTATCTATGTGGATGAAATTGATAAAAT
TGCCAAAAAAGGTGAAAACGTGTCCATTACGCGGGATGTATCTGGTGAAGGTGTTCAGCAGGCTCTCCTAAAAATTATCG
AGGGGACAGTTGCTAGCGTACCACCACAGGGAGGACGTAAACATCCAAACCAAGAGATGATCCATGTAGACACCAAGAAC
ATCCTCTTCATCGTAGGTGGTGCTTTTGATGGTATTGAGGAAATTGTTAAACAACGTCTCGGCGAAAAAATTATTGGATT
TGGTCAGAATAATCGTGCCATTGATGAAAAAGAATCCTACATGCAGCATATTATCGCTGATGATATTCAAAAATTTGGTA
TCATTCCAGAATTGATTGGTCGTTTACCAGTTTTTGCAGCTCTGGATCAACTGACAACAGAGGATTTGATTCGCATTCTG
ACTGAACCTAAAAATGCTCTTGTGAAGCAATACCAAACGCTCCTTTCGTACGATGATGTGGAATTAGAATTTGACGAGGA
TGCTTTGGAGGAAATTGCTAAAAAAGCAATTGAGCGTAAAACAGGTGCTCGTGGTCTTCGCTCCATTATTGAGGAAACAA
TGCTGGATGTCATGTTTGAAGTGCCGGGTCAAGATGAGGTTAAGCGTGTTCGAGTAACCAAAGCTGCAGTAAATGGCAAG
GAAAAGCCACTACTAGAAACTGCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpX | Streptococcus mutans UA159 |
83.374 |
100 |
0.836 |
| clpX | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
57.96 |
98.529 |
0.571 |