Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   U0450_RS05270 Genome accession   NZ_CP139863
Coordinates   1050195..1050953 (-) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae strain 15P2112     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1045195..1055953
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U0450_RS05245 pth 1045228..1045797 (-) 570 WP_000163928.1 aminoacyl-tRNA hydrolase -
  U0450_RS05250 ychF 1045868..1046983 (-) 1116 WP_001218707.1 redox-regulated ATPase YchF -
  U0450_RS05255 - 1047067..1047261 (-) 195 WP_000285194.1 DUF951 domain-containing protein -
  U0450_RS05260 dnaN 1047326..1048462 (-) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  U0450_RS05265 dnaA 1048621..1049982 (-) 1362 WP_000660618.1 chromosomal replication initiator protein DnaA -
  U0450_RS05270 spo0J 1050195..1050953 (-) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator
  U0450_RS05275 htrA 1051011..1052192 (-) 1182 WP_000681598.1 S1C family serine protease Regulator
  U0450_RS05280 rlmH 1052375..1052854 (+) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  U0450_RS05290 comC/comC1 1053136..1053261 (+) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  U0450_RS05295 comD/comD1 1053282..1054607 (+) 1326 WP_000362880.1 competence system sensor histidine kinase ComD Regulator
  U0450_RS05300 comE 1054604..1055356 (+) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=911556 U0450_RS05270 WP_000410378.1 1050195..1050953(-) (spo0J) [Streptococcus pneumoniae strain 15P2112]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=911556 U0450_RS05270 WP_000410378.1 1050195..1050953(-) (spo0J) [Streptococcus pneumoniae strain 15P2112]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
ATTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508