Detailed information NTG0911548

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: ABVR75_RS04005
• Genome accession: NZ_CP159464
• Coordinates: 762513..764930 (+)
• Length: 805 a.a.
• NCBI ID: WP_016264861.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei subsp. sakei strain CBA3649
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 757513..769930

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABVR75_RS03975 (ABVR75_03975)	recN	757827..759530 (+)	1704	WP_101377783.1	DNA repair protein RecN	Machinery gene
ABVR75_RS03980 (ABVR75_03980)	-	759589..759912 (-)	324	WP_016264858.1	hypothetical protein	-
ABVR75_RS03985 (ABVR75_03985)	-	760032..760259 (+)	228	WP_197704094.1	YdbC family protein	-
ABVR75_RS03990 (ABVR75_03990)	gmk	760332..760943 (+)	612	WP_011374394.1	guanylate kinase	-
ABVR75_RS03995 (ABVR75_03995)	rpoZ	760948..761205 (+)	258	WP_011374395.1	DNA-directed RNA polymerase subunit omega	-
ABVR75_RS04000 (ABVR75_04000)	coaBC	761294..762511 (+)	1218	WP_016264860.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	-
ABVR75_RS04005 (ABVR75_04005)	priA	762513..764930 (+)	2418	WP_016264861.1	primosomal protein N'	Machinery gene
ABVR75_RS04010 (ABVR75_04010)	fmt	764950..765906 (+)	957	WP_025015869.1	methionyl-tRNA formyltransferase	-
ABVR75_RS04015 (ABVR75_04015)	rsmB	765896..767239 (+)	1344	WP_056936395.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
ABVR75_RS04020 (ABVR75_04020)	-	767261..768007 (+)	747	WP_025015868.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-
ABVR75_RS04025 (ABVR75_04025)	pknB	768004..769887 (+)	1884	WP_099960271.1	Stk1 family PASTA domain-containing Ser/Thr kinase	Regulator

Sequence

Protein

• Length: 805 a.a.
• Molecular weight: 90603.18 Da
• Isoelectric Point: 8.0167

>NTDB_id=911548 ABVR75_RS04005 WP_016264861.1 762513..764930(+) (priA) [Latilactobacillus sakei subsp. sakei strain CBA3649]
MPQIAKVIVDVPTMQTNRPYDYQVPVTLVDVIQPGMRVIIPFGNGDRKIQGFVLQVLDQPSFTGQLKAIEAVVDLTPAVN
PELLSLSDWLAQQTYAFQITCLQTMLPSVMRAKYTKTATLIDEIPADLQASLFNGNDELTFDQNLAPDKLKQLMQLQRQG
KISVTYHVDNRAQVKQLTAIEPALSFEQLEEARMGLRKSAQKQSQLISYLQTLIDQEAPTLLKTILEKTTFTRENIRIGA
EKGWLRQVKVEAYRNPYANAVQPTHKMTLTSEQKTAVDAVVQSASTDASEVFLIEGVTGSGKTEVYLQTIDAVLQQGKTA
LMLVPEIALTPQMVQRVKGRFGDLVAVLHSGLSEGEKYDEWRRIERKEARVVVGARSAIFAPLEDIGVIIMDEEHEASYK
QDESPRYHARDVAIWRSQYHHCPVILGSATPSLESRARAQKDVYHLIRLTQRVNQQALPAVELVDMREAMKVQKASNFSP
ALLAGIKERLQKGEQSVLLLNRRGFSSFIMCRDCGFVLQCPNCDISLTLHMDTHSMKCHYCGHEEAIPRICPSCQSRQIR
YFGTGTQKVEAELQELIPEARILRMDVDTTRKKGAHAKLLKKFGDHEADILLGTQMIAKGLDFPDVTLVGVINADTALGL
PDFRASERTFQLLTQVSGRAGRADKVGQVIVQSYNPENYAIQFAKQHDYEGFYQYEMAVRHRGGYPPYYFTVKVTVSHPE
EALAAKKSFQIAKQMRPILSDQALILGPTPKSIARINNRYFYQIVIKYKQEPQLQAKLAEILETTQIDTRHGFKIGLDNE
PLQFT

Nucleotide

• Length: 2418 bp

>NTDB_id=911548 ABVR75_RS04005 WP_016264861.1 762513..764930(+) (priA) [Latilactobacillus sakei subsp. sakei strain CBA3649]
ATGCCACAGATTGCTAAAGTAATCGTTGATGTGCCGACAATGCAAACTAATCGGCCATATGATTATCAGGTACCGGTCAC
TTTAGTTGATGTCATTCAACCTGGGATGCGGGTTATTATTCCGTTTGGAAATGGTGATCGTAAGATTCAGGGCTTTGTCT
TGCAAGTTTTAGACCAGCCAAGCTTTACGGGCCAATTAAAGGCAATCGAGGCAGTTGTTGATTTAACGCCAGCGGTTAAC
CCTGAATTACTATCACTTTCAGATTGGTTAGCACAACAGACGTACGCTTTTCAGATCACGTGTCTGCAGACGATGTTACC
CAGTGTGATGCGGGCTAAATATACGAAAACTGCGACGTTAATTGATGAAATTCCAGCGGACTTACAGGCCAGTCTGTTCA
ATGGCAATGACGAGTTGACTTTTGATCAGAATCTAGCGCCTGATAAGTTAAAACAACTCATGCAATTGCAGCGCCAAGGT
AAAATTAGCGTCACTTATCACGTTGATAACCGGGCACAAGTTAAGCAATTAACGGCGATTGAGCCCGCACTGAGTTTTGA
ACAATTGGAAGAAGCACGGATGGGTTTACGAAAGTCAGCCCAGAAGCAAAGCCAATTAATCAGTTATCTGCAAACGCTGA
TTGATCAAGAGGCACCAACTTTATTAAAAACGATTTTAGAAAAAACAACTTTTACGCGGGAAAATATTCGAATCGGTGCG
GAAAAAGGCTGGTTACGCCAAGTTAAGGTGGAAGCTTACCGGAATCCGTACGCTAATGCTGTTCAACCAACCCACAAAAT
GACGCTAACGAGCGAACAAAAAACCGCAGTTGATGCGGTCGTTCAATCCGCATCAACGGATGCCTCAGAAGTATTCTTAA
TTGAAGGTGTCACCGGCAGTGGGAAGACCGAAGTTTATTTACAAACAATTGATGCGGTCTTGCAACAAGGCAAGACCGCA
CTGATGTTAGTCCCTGAAATTGCTTTGACGCCGCAGATGGTGCAACGCGTGAAGGGCCGCTTTGGTGATTTAGTTGCTGT
GTTACATAGTGGCTTGTCTGAAGGTGAGAAATACGACGAATGGCGGCGCATTGAACGCAAAGAAGCGCGCGTGGTCGTCG
GTGCCCGCTCAGCCATTTTTGCGCCACTTGAAGATATTGGCGTGATTATTATGGATGAAGAACATGAAGCCAGTTATAAA
CAAGACGAAAGTCCGCGTTATCATGCACGCGACGTTGCGATTTGGCGGAGTCAGTATCATCACTGCCCCGTCATTTTAGG
CAGCGCCACGCCATCGTTAGAATCCCGCGCTCGGGCGCAAAAAGATGTCTACCATCTGATTCGCCTGACGCAACGGGTGA
ACCAACAAGCCTTACCAGCTGTTGAACTAGTTGATATGCGCGAAGCGATGAAGGTTCAAAAAGCCAGCAACTTTTCACCG
GCGTTATTAGCCGGCATCAAAGAACGGCTGCAAAAGGGCGAACAAAGTGTGTTACTCCTAAATCGTCGCGGTTTTTCATC
ATTTATCATGTGTCGGGATTGCGGGTTTGTCTTGCAGTGTCCCAACTGTGATATTTCGTTGACGTTACACATGGATACGC
ATTCGATGAAATGCCATTATTGTGGGCACGAAGAAGCCATTCCTAGGATTTGCCCTAGCTGTCAGAGTCGCCAAATTCGT
TATTTTGGGACTGGCACGCAAAAAGTCGAAGCTGAATTACAAGAATTAATCCCTGAAGCACGGATTTTGCGGATGGACGT
TGATACGACTCGGAAAAAAGGCGCGCATGCTAAATTATTGAAAAAATTTGGTGATCACGAAGCTGATATCTTATTAGGGA
CGCAGATGATTGCCAAAGGCTTAGATTTCCCAGATGTAACGTTAGTCGGGGTGATCAACGCTGATACAGCTTTGGGTTTA
CCGGATTTTCGGGCGAGTGAGCGGACTTTCCAATTATTAACGCAGGTTAGTGGTCGTGCGGGTCGTGCGGATAAGGTGGG
GCAAGTGATTGTTCAATCTTATAATCCCGAGAATTACGCGATTCAATTTGCTAAACAGCACGATTATGAAGGATTTTATC
AATATGAAATGGCGGTGCGCCACCGTGGCGGCTATCCGCCTTATTACTTTACGGTGAAGGTGACGGTTAGCCACCCTGAA
GAAGCACTTGCCGCAAAGAAGAGTTTTCAAATTGCCAAACAGATGCGACCGATTTTATCCGACCAAGCACTGATTCTCGG
GCCCACCCCGAAATCAATTGCGCGGATTAATAATCGTTATTTTTACCAAATTGTGATTAAATATAAACAGGAACCACAAC
TTCAGGCTAAATTAGCCGAAATACTAGAGACCACCCAAATCGATACTCGTCACGGGTTTAAGATTGGGCTGGATAATGAA
CCTCTACAATTTACTTAA

Domains

Predicted by InterProScan.

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (520-545)

• Type III restriction enzyme, res subunit (ResIII) (266-432)

• Primosomal protein N C-terminal domain (PriA_C) (707-801)

• Helicase conserved C-terminal domain (Helicase_C) (562-663)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (6-107)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	51.792	100	0.52