Detailed information
Bioinformatically predicted
Overview
| Name | comA/nlmT | Type | Regulator |
| Locus tag | U0450_RS02920 | Genome accession | NZ_CP139863 |
| Coordinates | 582429..582593 (+) | Length | 54 a.a. |
| NCBI ID | WP_306420852.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain 15P2112 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 577429..587593
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U0450_RS02880 | - | 577940..578343 (-) | 404 | Protein_572 | immunity protein | - |
| U0450_RS02885 | - | 578340..578504 (-) | 165 | WP_000727118.1 | hypothetical protein | - |
| U0450_RS02890 | - | 578801..578920 (-) | 120 | WP_050233614.1 | PncF family bacteriocin immunity protein | - |
| U0450_RS02895 | blpU | 578923..579153 (-) | 231 | WP_050243503.1 | bacteriocin-like peptide BlpU | - |
| U0450_RS02900 | blpJ | 579222..579491 (-) | 270 | WP_001093248.1 | bacteriocin-like peptide BlpJ | - |
| U0450_RS02905 | blpI | 579958..580155 (-) | 198 | WP_001093259.1 | bacteriocin-like peptide BlpI | - |
| U0450_RS02910 | comA/nlmT | 580437..581024 (+) | 588 | WP_000205166.1 | cysteine peptidase family C39 domain-containing protein | Regulator |
| U0450_RS02915 | blpA | 580951..582219 (+) | 1269 | Protein_579 | peptide cleavage/export ABC transporter BlpA | - |
| U0450_RS02920 | comA/nlmT | 582429..582593 (+) | 165 | WP_306420852.1 | hypothetical protein | Regulator |
| U0450_RS02925 | - | 582604..583965 (+) | 1362 | WP_050211505.1 | bacteriocin secretion accessory protein | - |
| U0450_RS02930 | blpC | 584022..584177 (+) | 156 | WP_061450964.1 | quorum-sensing system pheromone BlpC | - |
| U0450_RS02935 | - | 584221..585561 (-) | 1341 | WP_127244994.1 | sensor histidine kinase | - |
| U0450_RS02940 | comE/blpR | 585575..586312 (-) | 738 | WP_001219126.1 | response regulator transcription factor | Regulator |
| U0450_RS02945 | - | 586317..586655 (-) | 339 | WP_050115203.1 | LytTR family DNA-binding domain-containing protein | - |
| U0450_RS02950 | - | 586931..587260 (+) | 330 | WP_000132572.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 54 a.a. Molecular weight: 6235.24 Da Isoelectric Point: 8.7682
>NTDB_id=911543 U0450_RS02920 WP_306420852.1 582429..582593(+) (comA/nlmT) [Streptococcus pneumoniae strain 15P2112]
MSLTDKTILFVAHRLSIAERTNRVIVLDQGKIIEVGSHQELMQAQGFYHHLFNK
MSLTDKTILFVAHRLSIAERTNRVIVLDQGKIIEVGSHQELMQAQGFYHHLFNK
Nucleotide
Download Length: 165 bp
>NTDB_id=911543 U0450_RS02920 WP_306420852.1 582429..582593(+) (comA/nlmT) [Streptococcus pneumoniae strain 15P2112]
ATGTCCCTAACTGATAAAACCATTCTCTTTGTAGCCCATCGTCTCAGTATAGCCGAACGAACTAACCGTGTCATTGTTCT
TGACCAGGGGAAAATCATTGAAGTTGGTAGTCACCAAGAGTTAATGCAAGCGCAAGGATTCTACCATCATCTATTCAATA
AATAA
ATGTCCCTAACTGATAAAACCATTCTCTTTGTAGCCCATCGTCTCAGTATAGCCGAACGAACTAACCGTGTCATTGTTCT
TGACCAGGGGAAAATCATTGAAGTTGGTAGTCACCAAGAGTTAATGCAAGCGCAAGGATTCTACCATCATCTATTCAATA
AATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA/nlmT | Streptococcus mutans UA159 |
64.151 |
98.148 |
0.63 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
67.347 |
90.741 |
0.611 |
| comA | Streptococcus mitis NCTC 12261 |
63.265 |
90.741 |
0.574 |
| comA | Streptococcus pneumoniae TIGR4 |
63.265 |
90.741 |
0.574 |
| comA | Streptococcus pneumoniae Rx1 |
63.265 |
90.741 |
0.574 |
| comA | Streptococcus pneumoniae D39 |
63.265 |
90.741 |
0.574 |
| comA | Streptococcus pneumoniae R6 |
63.265 |
90.741 |
0.574 |
| comA | Streptococcus mitis SK321 |
61.224 |
90.741 |
0.556 |
| rcrQ | Streptococcus mutans UA159 |
43.75 |
88.889 |
0.389 |