Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   R6I59_RS17220 Genome accession   NZ_CP139744
Coordinates   3255598..3256497 (-) Length   299 a.a.
NCBI ID   WP_003243039.1    Uniprot ID   G9LQ79
Organism   Bacillus subtilis isolate FELIX_MS255     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3250598..3261497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R6I59_RS17185 (R6I59_17185) mrpE 3250838..3251314 (+) 477 WP_003244015.1 Na+/H+ antiporter subunit E -
  R6I59_RS17190 (R6I59_17190) mrpF 3251314..3251598 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  R6I59_RS17195 (R6I59_17195) mnhG 3251582..3251956 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  R6I59_RS17200 (R6I59_17200) yuxO 3251995..3252375 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  R6I59_RS17205 (R6I59_17205) comA 3252394..3253038 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  R6I59_RS17210 (R6I59_17210) comP 3253119..3255428 (-) 2310 WP_032723438.1 two-component system sensor histidine kinase ComP Regulator
  R6I59_RS17215 (R6I59_17215) comX 3255443..3255610 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  R6I59_RS17220 (R6I59_17220) comQ 3255598..3256497 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  R6I59_RS17225 (R6I59_17225) degQ 3256682..3256822 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  R6I59_RS17230 (R6I59_17230) - 3257044..3257169 (+) 126 WP_003228793.1 hypothetical protein -
  R6I59_RS17235 (R6I59_17235) - 3257283..3257651 (+) 369 WP_003243784.1 hypothetical protein -
  R6I59_RS17240 (R6I59_17240) pdeH 3257627..3258856 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  R6I59_RS17245 (R6I59_17245) pncB 3258993..3260465 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  R6I59_RS17250 (R6I59_17250) pncA 3260481..3261032 (-) 552 WP_003243099.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 299 a.a.        Molecular weight: 34218.11 Da        Isoelectric Point: 4.8304

>NTDB_id=910837 R6I59_RS17220 WP_003243039.1 3255598..3256497(-) (comQ) [Bacillus subtilis isolate FELIX_MS255]
MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGEYNETVERYSYYKGIIAQISGDYYVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE
KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=910837 R6I59_RS17220 WP_003243039.1 3255598..3256497(-) (comQ) [Bacillus subtilis isolate FELIX_MS255]
ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGAATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATAGCTCAAATTTCTGGAGA
TTATTATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC
TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG
AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT
TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG
ATACAAGATGCAAGACCTAA

Domains


Predicted by InterproScan.

(44-218)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G9LQ79

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

100

100

1