Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SPL95_RS28830 Genome accession   NZ_CP139639
Coordinates   6214115..6214522 (-) Length   135 a.a.
NCBI ID   WP_010564379.1    Uniprot ID   A0A7Y8D5M8
Organism   Pseudomonas canadensis strain Pcan-CK-23     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6209115..6219522
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPL95_RS28815 (SPL95_28815) - 6211118..6213169 (-) 2052 WP_028618295.1 methyl-accepting chemotaxis protein -
  SPL95_RS28820 (SPL95_28820) - 6213166..6213690 (-) 525 WP_028618296.1 chemotaxis protein CheW -
  SPL95_RS28825 (SPL95_28825) pilH 6213703..6214068 (-) 366 WP_014720320.1 twitching motility response regulator PilH -
  SPL95_RS28830 (SPL95_28830) pilG 6214115..6214522 (-) 408 WP_010564379.1 twitching motility response regulator PilG Regulator
  SPL95_RS28835 (SPL95_28835) gshB 6214762..6215715 (+) 954 WP_028618297.1 glutathione synthase -
  SPL95_RS28840 (SPL95_28840) - 6215793..6216698 (+) 906 WP_323988130.1 energy transducer TonB -
  SPL95_RS28845 (SPL95_28845) - 6216766..6217335 (+) 570 WP_028618299.1 YqgE/AlgH family protein -
  SPL95_RS28850 (SPL95_28850) ruvX 6217335..6217772 (+) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  SPL95_RS28855 (SPL95_28855) pyrR 6217948..6218454 (+) 507 WP_016976043.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  SPL95_RS28860 (SPL95_28860) - 6218479..6219483 (+) 1005 WP_016976042.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14906.40 Da        Isoelectric Point: 7.3842

>NTDB_id=910402 SPL95_RS28830 WP_010564379.1 6214115..6214522(-) (pilG) [Pseudomonas canadensis strain Pcan-CK-23]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=910402 SPL95_RS28830 WP_010564379.1 6214115..6214522(-) (pilG) [Pseudomonas canadensis strain Pcan-CK-23]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGATGATTCGAAGACGATCCGCCGCACCGCTGAAACCTTGTT
GAAGAACGTAGGGTGCGATGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCCCGGATTGTTGATCATCACCCGCATA
TTATTTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCGCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCGTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGCGCGATCAAGGCCTACGTGCCGGGGTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y8D5M8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.4

92.593

0.652
  vicR Streptococcus mutans UA159

38.889

93.333

0.363